Gene Information

Name : XOC_4388 (XOC_4388)
Accession : YP_005630626.1
Strain : Xanthomonas oryzae BLS256
Genome accession: NC_017267
Putative virulence/resistance : Unknown
Product : ISXo8
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4515876 - 4517258 bp
Length : 1383 bp
Strand : +
Note : -

DNA sequence :
GTGTTACAAATAATCGTACCTTTGTGCCACTATTGGAAGACCTTCAGGCCGCGCGGGAGAGCTGTGTTGAATAGGACACT
GGAAGCGCGTTTTGAACAGTACGGGAAAGTAGTGGCTGCCGCCCTGTCCCATGCGGATCGCAAACAGCCCGCACACTGGT
ACCTGAAGGGGTTGCTACTGCCTGGAGGGCGCAAGAGCGTGGAGCCCATGGCCGCGCGGGTGCACCCGCAGAACGTGCGC
TCAGCCCATCAATCGATGCACCATCTGGTGGCCGATGCCGACTGGAGCGATCAAGCGCTGCTGGCGGCGGTGGCGGCACA
GGTGCTGCCGCCCCTGAGCAGGAAGAGCGCAGCGTGTCACTGGATCGTGGACGACACGGGATTTTCAAAGAAGGGGGTGC
ATTCGGTCGGTGTTGCACGCCAGTACTGCGGCCGCCTTGGCAAGACGGACAATTGCCAGGTTGCCGTGAGTTTGTCGATC
GCCAACGAACACGGCAGCCTGCCAGTGGGCTATCGGCTGTATCTTCCCGAGCAGTGGGCTCAGGACACTGTGCGGCGCAA
GAAGGCAGGCGTTCCGGATCAGGTCGTGTTTCAGACCAAGACAGCGCTGGCCATGGATCAGATCGACAGTGCGCTGGCGA
CAGGGATTGCGGCAGGCGTCGTGCTAGCCGATGCGGCCTACGGCACCCAGACCCACTGGCGAGACCAGCTCAGCGAACGC
GGCCTGCTGTACATGGTTGGCGTCCGCAGCAACACGAAGGTCTGGTGGGGATCGCACCAACCTGCGCCCATGCCGCCAGC
CAGCCCTAAGGGCGGTCGGCCCCGCACACGACCGATGCGCGATAGCGCACATGCGCCGATCTCGGTACATGAAGTCGCGC
AGCGCTTGCCCGCAAGGACGTATCGGCAGGTCAGCTGGCGCCAGGGCAGCGAGGCAACGCTCAGTTCGCGGTTCGCGGCG
GTGCGGGTTCGTGCCGCACACAATCGCCAGGCACATGACGAGCAGTGGCTGCTGATCGAGTGGCCGCCGGGAGAGTCCGA
GCCCCGCCACTACTGGTTCTCGACGCTACCAAAGCAAACGCCGGTCAAGACACTGGTTGCCACGGCACACGGCCGATGGC
GGATTGAGCGCGATTATCAGGAGCTGAAGTCGGAGTTGGGCCTGCATCACTATGAAGGGCGCAACTGGCGTGGTTTTCAC
CATCACGCCAGTCTGTGCATCGCCGCATACGGGTTCTTGATGCGCGAGCGCCTGCGCAGTAAAAAAAACTCCGTCGCATT
CAAGATGCCTGCAGTATCCAAAAGCGTCCGCCCGCGCGGGTCTGGCCCCAATGCAACGTCACCATCCCAACTCGATTGCC
ACGCTGGCCTTCGGACTGGCTAG

Protein sequence :
MLQIIVPLCHYWKTFRPRGRAVLNRTLEARFEQYGKVVAAALSHADRKQPAHWYLKGLLLPGGRKSVEPMAARVHPQNVR
SAHQSMHHLVADADWSDQALLAAVAAQVLPPLSRKSAACHWIVDDTGFSKKGVHSVGVARQYCGRLGKTDNCQVAVSLSI
ANEHGSLPVGYRLYLPEQWAQDTVRRKKAGVPDQVVFQTKTALAMDQIDSALATGIAAGVVLADAAYGTQTHWRDQLSER
GLLYMVGVRSNTKVWWGSHQPAPMPPASPKGGRPRTRPMRDSAHAPISVHEVAQRLPARTYRQVSWRQGSEATLSSRFAA
VRVRAAHNRQAHDEQWLLIEWPPGESEPRHYWFSTLPKQTPVKTLVATAHGRWRIERDYQELKSELGLHHYEGRNWRGFH
HHASLCIAAYGFLMRERLRSKKNSVAFKMPAVSKSVRPRGSGPNATSPSQLDCHAGLRTG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
XOO0073 YP_198712.1 ISXo8 transposase Not tested Hrp PAI Protein 1e-147 98
XOO0069 YP_198708.1 ISXo8 transposase Not tested Hrp PAI Protein 2e-132 97