Gene Information

Name : XOC_0458 (XOC_0458)
Accession : YP_005626860.1
Strain : Xanthomonas oryzae BLS256
Genome accession: NC_017267
Putative virulence/resistance : Unknown
Product : IS1403 transposase, IS3 family
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 461960 - 462946 bp
Length : 987 bp
Strand : -
Note : -

DNA sequence :
TTGGCGCAGCAAGTTCGGCGGCATGAGCGTGCCCGATGCCAAGCGGCTCAAGGACCTGGAGGCCGAGAACACGCGACTGA
AGAAGTTGCTGGCCGAGCAGGTGTTCCAGAACGACCTGATCAAGGATGCGCTGCAAAAACAATGGTGAGCGCACCGGCGC
GTCGTACGCTGGTGCGCGAGTGGATCGACGGTGGCGCCAGCGAGCGCTGCGCCCTGGCGGCGATCGGCATGAGCGCCAGT
GCGCTGCGCTATTGCCCGCGCGAGGACCGCAACGTTGAGCTGCGCGAGCGCATCCTTGCGTTGGCGCATCGCCATCGCCG
CTATGGCGTGGGGATGATCTCTCTCAAGCTGCGACAGGAAGGGCGTCTCGTGAACTATAAGCGGGTGGAGCGGCGGTATC
GCCAGCAGCAGCTGCAGGTCCGCCGCCGCACGCGTAAAAAGGTGCCGGTAGGCGAGCGTGCGCCGTTGCTGCGGCCCACC
AAGGCCAACCAGGTGTGGTCGATGGACGTCGTGTTCGACCGCACCGCCGAAGGCAGGGCAATCAAATGCCTGGTGATCGT
GGACGACGCAACCCACGAAGCGGTCGCCATCGACGTGGAGCGTGCGATCTCGGGACACGGCGTTGTGCGCGTGCTGGATC
GGTTGGCACACAGTCGCGGCCTGCCGAAGATGATCCGCACGGACAATGGCAAGGAGTTCTGTGGCAAGGCCATGGTCGCC
TGGGCGCATGCCAATCGTGTGCAGCGACGCCAGATCCAGCCTGGCAAGCCGAACCAGAATGCCTACGTCGAATCCTTCAA
CGGCCGGCGACGCGACGAATGCCTCAACGAACACTGGTTCCCAACGCTGCTGCATGCGCGCACCGAGATCGAACGCTGGC
GCCGCGAATACAACGAACACCGCCCCAAGAAAGCAATCGGCGCAATGACGCCGGCGGCCTATGCCCAGCAGTTGGCCCAT
AGCGATATCATCAACCCCGGACGCTAA

Protein sequence :
MAQQVRRHERARCQAAQGPGGREHATEEVAGRAGVPERPDQGCAAKTMVSAPARRTLVREWIDGGASERCALAAIGMSAS
ALRYCPREDRNVELRERILALAHRHRRYGVGMISLKLRQEGRLVNYKRVERRYRQQQLQVRRRTRKKVPVGERAPLLRPT
KANQVWSMDVVFDRTAEGRAIKCLVIVDDATHEAVAIDVERAISGHGVVRVLDRLAHSRGLPKMIRTDNGKEFCGKAMVA
WAHANRVQRRQIQPGKPNQNAYVESFNGRRRDECLNEHWFPTLLHARTEIERWRREYNEHRPKKAIGAMTPAAYAQQLAH
SDIINPGR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed ABR13540.1 insertion sequence IS407 OrfB Not tested PAGI-8 Protein 1e-49 51
XCV0439 YP_362170.1 ISRSO12 transposase (fragment) Not tested Hrp PAI Protein 5e-26 41