Gene Information

Name : XOC_4254 (XOC_4254)
Accession : YP_005630495.1
Strain : Xanthomonas oryzae BLS256
Genome accession: NC_017267
Putative virulence/resistance : Unknown
Product : transposase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4404593 - 4405060 bp
Length : 468 bp
Strand : -
Note : -

DNA sequence :
GTGGCCTTCGTCATCGACGTGTTCGCCCGCCGGATCGTGGGCTGGAAAGCATCGTCATCAATGCAGACCGACTTCGTGCT
CGATGCGCTCGAACAGGCGCTGTATGCCAGGAAGCCGGTCGGCCCGGATCGCCTGATCCACCACAGCGACCGGGGCGTGC
AGTACGTCTCGATCCGCTACACCGAGCGGCTCGCCGAGGCCGGCCTGGAGCCCTCGGTGGGCAGTGTGGGCGACTCGTAC
GACAACGCGCTGGCCGAGACCATCAATGGCCTGTACAAGGCCGAGGTGATCCACCGCCAGTCGTCCTGGCGTACGCGCGA
GGAGGTGGAGTGGGCCACGCTCACCTGGGTCGATTGGTTCAACAATCGTCGCTTGCTTGAGCCGATCGGCAGCATCCCAC
CGGCCGAGGCCCAAGCCAACTATTATTCCAAATCCAAGCAACCCAACGAGTCCGCCATGTCGGCGTGA

Protein sequence :
MAFVIDVFARRIVGWKASSSMQTDFVLDALEQALYARKPVGPDRLIHHSDRGVQYVSIRYTERLAEAGLEPSVGSVGDSY
DNALAETINGLYKAEVIHRQSSWRTREEVEWATLTWVDWFNNRRLLEPIGSIPPAEAQANYYSKSKQPNESAMSA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAT48693.1 unknown Not tested PAI I 4787 Protein 3e-33 68
r15 AAC61720.1 putative transposase R15 Not tested PAI I CFT073 Protein 2e-33 68
c3594 NP_755469.1 transposase Not tested PAI I CFT073 Protein 3e-38 68

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
XOC_4254 YP_005630495.1 transposase VFG1715 Protein 8e-39 68