Gene Information

Name : XOC_4080 (XOC_4080)
Accession : YP_005630327.1
Strain : Xanthomonas oryzae BLS256
Genome accession: NC_017267
Putative virulence/resistance : Unknown
Product : transposase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4237083 - 4237718 bp
Length : 636 bp
Strand : +
Note : -

DNA sequence :
ATGAAAACTGGCAGTTCCAGCACGCCAAAACCGCAGGTGAGGCCTTGCAATGGATGCGGTCTGGGGGTTTTTCAGGGGCG
ACTAAATAAGGTGCAGCTAGGCGAGCGTGCGCCGTTGCTGCGGCCCACCAAGGCCAACCAGGTGTGGTCGATGGACGTCG
TGTTCGACCGCACCGCCGAAGGCAGGGCAATCAAATGCCTGGTGATCGTGGACGATGCGACACACCATGCAGTCGCCATC
GAGGTGGAGCGTGCGATCTCGGGACACGGCGTTGTGCGCGTGCTGGATCGGTTGGCACACAGTCGCGGCCTGCCGAAGAT
GATCCGCACGGACAACGGCAAGGAGTTCTGTGGCAAGGCCATGGTCGCCTGGACGCATGCCAATCGTGTGCAGCGACGCC
AGATCCAGCCTGGCAAGCCGAACCAGAATGCCTACGTCGAATCCTTCAACGGCCGGCGACGCGACGAATGCCTCAACGAA
CACTGGTTCCCAACGCTGCTGCATGCGCGCACCGAGATCGAACGCTGGCGCCGCGAATACAACGAACACCGCCACAAAAA
AACAATCGGCGCAATGACGCCGGCGGCCTATGCCCAGCAGTTGGCCCATAGCGATATCATCAACCCCGGACGCTAA

Protein sequence :
MKTGSSSTPKPQVRPCNGCGLGVFQGRLNKVQLGERAPLLRPTKANQVWSMDVVFDRTAEGRAIKCLVIVDDATHHAVAI
EVERAISGHGVVRVLDRLAHSRGLPKMIRTDNGKEFCGKAMVAWTHANRVQRRQIQPGKPNQNAYVESFNGRRRDECLNE
HWFPTLLHARTEIERWRREYNEHRHKKTIGAMTPAAYAQQLAHSDIINPGR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed ABR13352.1 insertion sequence IS407 OrfB Not tested PAGI-5 Protein 7e-42 54
unnamed CAB46578.1 IS1222-like transposase Not tested HPI Protein 1e-31 51
RS13 AAP82958.1 putative transposase Not tested PAPI-2 Protein 2e-30 51
unnamed ABR13540.1 insertion sequence IS407 OrfB Not tested PAGI-8 Protein 5e-42 49