Gene Information

Name : XOC_3903 (XOC_3903)
Accession : YP_005630160.1
Strain : Xanthomonas oryzae BLS256
Genome accession: NC_017267
Putative virulence/resistance : Resistance
Product : ABC transporter ATP-binding protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4040244 - 4040963 bp
Length : 720 bp
Strand : +
Note : -

DNA sequence : 
ATGCTCAAGATGCAGGCAGTCTCCAAGGTCTTCCGCACCGAACAGGTGGAAACGCACGCGCTGCGGTCGCTGGAACTGCA
TGTGCGCGAAGGCGAATTCGTCGCGGTCACCGGCCCCTCCGGCTCGGGCAAGACCACCTTTCTCAACCTGGCCGGGCTGC
TGGAAACCTTCACCAGCGGGCAGTACCTGCTCGATGGCGAAGACGTCAGCCATCTGTCCGATGACGCGCGTTCGCGGCTG
CGCAATCAGAAGATCGGTTTCATCTTTCAGGGCTTCAACCTGATTCCCGACCTCAACCTGTTCGACAACGTCGATGTGCC
GCTGCGCTATCGCGGTATGGCCGCGGCCGAGCGCAAGCAGCGCATCGAAGAGGCACTGACCAAGGTCGGCCTGGGCTCGC
GCCTGAAGCACTATCCCACCGAACTGTCCGGCGGCCAGCAGCAGCGCGCTGCGATTGCGCGCGCACTGGCCGGCAGCCCG
CGCCTGCTGCTGGCCGACGAACCTACCGGCAACCTCGACTCGCAAATGGCACGCGGGGTGATGGAACTGCTGGAAGAGAT
CAACAGCCAGGGCACCACCATCGTCATGGTCACCCACGACCCGGAACTGGCCGCACGCGCGCAGCGCAACGTGCACATCG
TCGACGGCCAGGCCACCGATCTGCAGCGCGACCCCAGCCTGATGCGCGCGCGCGATTGCGCGCCCACCCTGGCCGACTGA

Protein sequence : 
MLKMQAVSKVFRTEQVETHALRSLELHVREGEFVAVTGPSGSGKTTFLNLAGLLETFTSGQYLLDGEDVSHLSDDARSRL
RNQKIGFIFQGFNLIPDLNLFDNVDVPLRYRGMAAAERKQRIEEALTKVGLGSRLKHYPTELSGGQQQRAAIARALAGSP
RLLLADEPTGNLDSQMARGVMELLEEINSQGTTIVMVTHDPELAARAQRNVHIVDGQATDLQRDPSLMRARDCAPTLAD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cur_1502 YP_001800896.1 cell division ATP-binding protein FtsE Not tested Not named Protein 2e-28 43
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-26 42
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 4e-27 41
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 4e-27 41
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 4e-27 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
XOC_3903 YP_005630160.1 ABC transporter ATP-binding protein NC_008702.1.4606598. Protein 2e-39 49
XOC_3903 YP_005630160.1 ABC transporter ATP-binding protein NC_012469.1.7686878. Protein 1e-43 48
XOC_3903 YP_005630160.1 ABC transporter ATP-binding protein CP001581.1.gene798.p Protein 3e-31 46