Gene Information

Name : metB (XOC_3870)
Accession : YP_005630128.1
Strain : Xanthomonas oryzae BLS256
Genome accession: NC_017267
Putative virulence/resistance : Resistance
Product : cystathionine gamma-synthase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4007885 - 4009081 bp
Length : 1197 bp
Strand : -
Note : -

DNA sequence :
ATGTCCAACCGCACCACTCATAGCCATGACGGCGATCGCGCGCTGTCGCTTGCAACGCTGGCGATCCATGGAGGGCAGTC
GCCGGATCCCAGCACCGGCGCAGTGATGCCGCCGATCTACGCCACGTCCACGTATGCGCAATCCAGCCCCGGCGAACACC
AGGGCTTCGAATATTCCCGCACCCACAACCCCACGCGCTTCGCCTACGAGCGCTGCGTGGCGGCGCTGGAAGGCGGCACG
CGCGCGTTCGCGTTCGCCTCCGGCATGGCTGCCACTTCCACCGTGATGGAGTTGCTGGATGCCGGCAGCCACGTGGTGGC
GATGGACGATCTGTACGGCGGCACCTTCCGCCTGTTCGAGCGTGTGCGCCGTCGCACCGCCGGCCTGGATTTCAGTTTCG
TCGACCTGACCGACCCGGTCGCGTTTGAGACGGCGATCCGCCCCGACACCAAGATGGTGTGGATCGAAACCCCGACCAAC
CCGATGCTCAAGCTGGTCGATATCGCGGCCATCGCGGCCATCGCGCGCAAGCATGGCCTGCTGACCGTGGTCGACAATAC
CTTTGCCTCGCCGATGCTGCAGCGCCCGCTGGAACTGGGTGCCGACCTCGTCGTGCACTCGGCCACCAAGTACCTCAACG
GCCACTCGGACATGGTGGGCGGCATTGCGGTGGTTGGCGACAACGCCGAGCTCGCCGAGCAGATGGCGTTCCTGCAGAAC
TCCATCGGTGGCGTGCAAGGCCCGTTCGACAGCTTCCTCGCCCTGCGCGGCCTGAAGACACTTCCGCTGCGCATGCGCGC
GCATTGCGAAAATGCCCTGGCGCTCGCGCAATGGCTGGAAACGCACCCCGCCATCGAAAAGGTGATCTACCCCGGCCTGG
CCTCGCACCGGCAGCATGTGCTCGCGAAACGCCAGATGTCCGGCTTCGGCGGCATCGTCTCCATCGTCCTCAAGGGCGGC
TTCGACGCAGCCAAGCGTTTCTGCGAGAAGACCGAACTGTTCACCCTGGCCGAATCGCTCGGTGGTGTTGAAAGCCTGGT
GAACCATCCCGCCGTCATGACGCACGCCTCCATCCCCGTGGCCCGCCGCGAGCAGCTCGGCATCAGCGATGCGCTGGTGC
GGTTGAGCGTGGGGATTGAGGATGTGAGGGATTTGCGTGGGGATCTTGCCGCGGCACTCTCCGGAGTGACCGAATGA

Protein sequence :
MSNRTTHSHDGDRALSLATLAIHGGQSPDPSTGAVMPPIYATSTYAQSSPGEHQGFEYSRTHNPTRFAYERCVAALEGGT
RAFAFASGMAATSTVMELLDAGSHVVAMDDLYGGTFRLFERVRRRTAGLDFSFVDLTDPVAFETAIRPDTKMVWIETPTN
PMLKLVDIAAIAAIARKHGLLTVVDNTFASPMLQRPLELGADLVVHSATKYLNGHSDMVGGIAVVGDNAELAEQMAFLQN
SIGGVQGPFDSFLALRGLKTLPLRMRAHCENALALAQWLETHPAIEKVIYPGLASHRQHVLAKRQMSGFGGIVSIVLKGG
FDAAKRFCEKTELFTLAESLGGVESLVNHPAVMTHASIPVARREQLGISDALVRLSVGIEDVRDLRGDLAAALSGVTE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SAR0460 YP_039909.1 Cys/Met metabolism PLP-dependent enzyme Not tested vSa¥á Protein 4e-82 50
SAS0418 YP_042545.1 Cys/Met metabolism PLP-dependent enzyme Not tested vSa¥á Protein 2e-83 50
metB YP_281510.1 cystathionine beta-lyase Not tested Not named Protein 4e-57 43

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
metB YP_005630128.1 cystathionine gamma-synthase BAC0207 Protein 1e-68 46