Gene Information

Name : xerD (XOC_3812)
Accession : YP_005630070.1
Strain : Xanthomonas oryzae BLS256
Genome accession: NC_017267
Putative virulence/resistance : Unknown
Product : tyrosine recombinase XerD
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3943997 - 3945007 bp
Length : 1011 bp
Strand : -
Note : -

DNA sequence : 
TTGTCTCGCAACGCACGCGCCACGTTCTATGCTGTTGCGATGTCTGCCAGCAGTCCTGCCGAACGCCGCCAACTCGCCCA
GCAGCTACCGCCGCTGCAGGCGGCCGATGCCGGTGTGATCGAGCGTTTCCTCGACCGGTTTTGGGCCGAGCAAGGCGTGG
CGCGGCAGACGCTGGAGAGCTACCGGCGCGATCTGGAAGGGTTGGCGCGCTGGCGCGACGGTGCCGGCGGCGGTTTGCTC
GGCATCGACCGCGCGGCATTGTTCGACTATCTGCGGTGGCGTGCCCAGGCCACGTACTCCCCGCGCAGCACGGCGCGGCT
GCTGTCGACCTTGCGTGCGTTCTACGGGTGGTGCCTGCGCGATGGCGTGCGCAGCGACGACCCGACAGCGCTGATCGACC
CGCCACAGCTGCCGCGCTCGCTGCCCAAAGCGTTGACTGAAAGTCAGATCGAGGCGCTGCTGGCCGCCCCCGAGGTGGAT
ACTCCTGCGGGCCTGCGCGACCGCGCCATGCTGGAGCTGATGTACGCCGCGGGCCTGCGTGTGAGCGAGCTGGTCAACCT
GCCGGCAGTCGGGGTGAATCTGCGCCAGGGCGTGTTGCGGGTCACCGGCAAGGGCAGCAAGGACCGGCTGGTGCCGCTGG
GCGAGGAATCCCAGCATTGGTTGGAACGTTACCTGCGCCAGGCGCGCCCGCTGCTGGCCGCGAACAAGCCGGTGGCGGCG
GTGGATGGCCAGGTGCCGTTATTCATCGACGCCGCCCGCCAAGCGCTCAGTCGTCAGCACTTCTGGGCGTTGGTCAAACG
CTACGCAGCGGTGGCCGGCATCGACCCGGCGACGGTCAGCCCACATGGGCTGCGCCACAGCTTTGCCACCCATCTGCTCA
ACCACGGCGCCGACCTGCGCGCGCTGCAGATGCTGTTGGGCCACAGCTCGTTGTCGACCACCCAGATCTATACGCTGGTG
GCGCGCCAGCATCTGCAGAAGCTGCACGCCAGCCATCATCCGCGTGGTTAG

Protein sequence : 
MSRNARATFYAVAMSASSPAERRQLAQQLPPLQAADAGVIERFLDRFWAEQGVARQTLESYRRDLEGLARWRDGAGGGLL
GIDRAALFDYLRWRAQATYSPRSTARLLSTLRAFYGWCLRDGVRSDDPTALIDPPQLPRSLPKALTESQIEALLAAPEVD
TPAGLRDRAMLELMYAAGLRVSELVNLPAVGVNLRQGVLRVTGKGSKDRLVPLGEESQHWLERYLRQARPLLAANKPVAA
VDGQVPLFIDAARQALSRQHFWALVKRYAAVAGIDPATVSPHGLRHSFATHLLNHGADLRALQMLLGHSSLSTTQIYTLV
ARQHLQKLHASHHPRG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00307 YP_008207772.1 Site-specific recombinase XerD Not tested AbaR25 Protein 4e-56 57
BJAB0868_00311 YP_008211637.1 Site-specific recombinase XerD Not tested AbaR26 Protein 4e-56 57