Gene Information

Name : XOC_3605 (XOC_3605)
Accession : YP_005629863.1
Strain : Xanthomonas oryzae BLS256
Genome accession: NC_017267
Putative virulence/resistance : Virulence
Product : two-component system response regulator protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3713097 - 3713624 bp
Length : 528 bp
Strand : -
Note : -

DNA sequence : 
ATGCGCATTCTGCTGGTTGAAGACGATCTTTCACTGGGCGAAGGCATTCGCACCGCGTTGCGGCGCGCAGCCTATGCGGT
GGACTGGGTGCATAACGGCGTCAGTGCGTTGATGGCGCTACAGGAGCAAACCATGGATCTGGTCATCCTGGATTTGGGGT
TGCCGCGCATGGATGGCATCGCGGTCATTCGCACCGCACGCGCACGTGCGGTGGACACGCCGATTCTGGTACTCAGCGCA
CGCGAACGTGCAGCCGACCGCGCGCTTGGCCTGGATGTCGGTGCAGAGGATTATCTGGGCAAGCCGTTCGACACCAATGA
ACTGTTGGCGCGGACGCGGGCCTTGCTGCGGCGCTCGGCCGGCCGCGCGCAGCCTGCATTGCAGGCCAGCGCATTGCGGC
TGGATCCGGCTGGCATGTCGGTGCGCTGGCATGGCCGCGATCTGGATCTGGCCCGTCGCGAATTCGCCCTGTTGTGGCTG
CTGATGGAGCAGTGTGGACGACCCATCGGTCGCGAACGCATTCAATAG

Protein sequence : 
MRILLVEDDLSLGEGIRTALRRAAYAVDWVHNGVSALMALQEQTMDLVILDLGLPRMDGIAVIRTARARAVDTPILVLSA
RERAADRALGLDVGAEDYLGKPFDTNELLARTRALLRRSAGRAQPALQASALRLDPAGMSVRWHGRDLDLARREFALLWL
LMEQCGRPIGRERIQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
armR AAN62112.1 putative response-regulator ArmR Not tested PAGI-2(C) Protein 2e-14 43
copR NP_460069.2 transcriptional regulatory protein YedW Not tested SPI-5 Protein 3e-16 42
copR AAC33719.1 regulatory protein CopR Not tested SPI-5 Protein 5e-16 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
XOC_3605 YP_005629863.1 two-component system response regulator protein BAC0197 Protein 8e-19 42
XOC_3605 YP_005629863.1 two-component system response regulator protein BAC0487 Protein 3e-12 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
XOC_3605 YP_005629863.1 two-component system response regulator protein VFG1390 Protein 2e-20 45
XOC_3605 YP_005629863.1 two-component system response regulator protein VFG0473 Protein 2e-17 42
XOC_3605 YP_005629863.1 two-component system response regulator protein VFG0596 Protein 7e-17 42