Gene Information

Name : XOC_3516 (XOC_3516)
Accession : YP_005629778.1
Strain : Xanthomonas oryzae BLS256
Genome accession: NC_017267
Putative virulence/resistance : Unknown
Product : transposase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3621863 - 3622888 bp
Length : 1026 bp
Strand : +
Note : -

DNA sequence :
TTGATCATGCAACAATCGTATAGAGCCAACGGGACAACGACGATGCAGCTTTCTTTCGGCGATGCGGAGTACAACGGCAA
GCGTAAGCGGACACGGCGCGAGGTGTTCTTGTCCGAGATGAATCAGGTGGTGCCTTGGAAGGGCCTGCTGGCGTTGATCG
AGCCGCACTACCCGACGTCGGGCCAGCCGGGCCGGCAGCCATATCCACTGGAGATGATGCTGCGCATCCATTTTTTGCAG
CAGTGGAACGCACTGAGCGATCCGGCAGCGGAAGAAGCGTTGTACGACACGGTGTCGATGCGCCGTTTCGCCAAGATAGG
TGGTCTGGATGAGGTGCCTGACGAGACCACGATTCTCAACTTCCGCCACTTGCTGGAGCGGCATGATTTGGCGCGCAAGC
TGTTTGATCGGGTCAACGCACACTTGTTGCGCAAGGGGCAGAGCCTGCGAGGCGGCACGATCGTGGACGCCACGATCATT
GCTGCGCCCAGTTCGATCAAGAACAAGGACGGTGCGCGCACCCCTGAAATGCATCAGACCAAAAAGGGCAACCAGTACTA
CTTCGGGATGAAAGCGCACATTGGCGTGGACGAGGAGTCTGGCCTGGTGCACCACGTGGAATGCACAGCAGCCAACGTGG
CCGACATCACGAAGGCGCACAAGCTGCTACACGGCAAGGAGGGCACGGTGAGCGGCGACAGCGGCTACACCGGGCTGGAC
AAGCACGAAGAGTTGAGGACCAAGCGCAAGCTACGCTACCTGATCGCCGAGAAGCCCTCGAAGCTGAAGCAGATCAAGAG
CAAACGCGAACTGAAGTTGACCAAGCGCTGGGAGCACGCTGAAGCCAGCCTGCATGCGAAGATGGAACATCTTTTTTCGG
GTGATCAAGCGCCAGTTTGGCTACGCCAAGGTGCGCTATCGCGGTTTGGCGAAGAACACCGCACAGGTGCTGACGCTGTT
TGCACTGTCGAATCTGTGGCTGACGCGCAAAGAGTTAATGCCTGCCGCAGGGAGGTGTGCCTGTAA

Protein sequence :
MIMQQSYRANGTTTMQLSFGDAEYNGKRKRTRREVFLSEMNQVVPWKGLLALIEPHYPTSGQPGRQPYPLEMMLRIHFLQ
QWNALSDPAAEEALYDTVSMRRFAKIGGLDEVPDETTILNFRHLLERHDLARKLFDRVNAHLLRKGQSLRGGTIVDATII
AAPSSIKNKDGARTPEMHQTKKGNQYYFGMKAHIGVDEESGLVHHVECTAANVADITKAHKLLHGKEGTVSGDSGYTGLD
KHEELRTKRKLRYLIAEKPSKLKQIKSKRELKLTKRWEHAEASLHAKMEHLFSGDQAPVWLRQGALSRFGEEHRTGADAV
CTVESVADAQRVNACRREVCL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tnp-33 AAN62255.1 transposase Not tested PAGI-3(SG) Protein 8e-73 59
tnpA ACF06175.1 putative transposase Not tested Tn5036-like Protein 5e-47 46
tnpA ACF06178.1 putative transposase Not tested Tn5036-like Protein 5e-47 46