Gene Information

Name : XOC_3448 (XOC_3448)
Accession : YP_005629709.1
Strain : Xanthomonas oryzae BLS256
Genome accession: NC_017267
Putative virulence/resistance : Unknown
Product : transposase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3542101 - 3542646 bp
Length : 546 bp
Strand : +
Note : -

DNA sequence :
GTGCAGCTAGGCGAGCGTGCGCCGTTGCTGCGGCCCACCAAGGCCAACCAGGTGTGGTCGATGGACGTCGTGTTCGACCG
CACCGCCGAAGGCAGGGCAATCAAATGCCTGGTGATCGTGGACGACGCAACCCACGAAGCGGTCGCCATCGACGTGGAGC
GTGCGATCTCGGGACACGGCGTTGTGCGCGTGCTGGATCGGTTGGCACACAGTCGCGGCCTGCCGAAGATGATCCGCACG
GACAATGGCAAGGAGTTCTGTGGCAAGGCCATGGTCGCCTGGGCGCATGCCAATCGTGAGCAGCGACGCCAGATCCAGCC
TGGCAAGCCGAACCAGAATGCCTACGTCGAATCCTTCAACGGCCGGCGACGCGACGAATGCCTCAACGAACACGGGTTCC
CAACGCTGCTGCATGCGCGCACCGAGATCGAACGCTGGCGCCGCGAATACAACGAACACCGCCACAAAAAAACAATCGGC
GGAATGACGCCGGCGGCCTATGCCCAGCAGTTGGCCCATAGCGATATCATCAACCCCGGACGCTAA

Protein sequence :
MQLGERAPLLRPTKANQVWSMDVVFDRTAEGRAIKCLVIVDDATHEAVAIDVERAISGHGVVRVLDRLAHSRGLPKMIRT
DNGKEFCGKAMVAWAHANREQRRQIQPGKPNQNAYVESFNGRRRDECLNEHGFPTLLHARTEIERWRREYNEHRHKKTIG
GMTPAAYAQQLAHSDIINPGR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed ABR13352.1 insertion sequence IS407 OrfB Not tested PAGI-5 Protein 1e-39 54
RS13 AAP82958.1 putative transposase Not tested PAPI-2 Protein 6e-30 52
unnamed CAB46578.1 IS1222-like transposase Not tested HPI Protein 3e-29 51