Gene Information

Name : mutS (XOC_3407)
Accession : YP_005629669.1
Strain : Xanthomonas oryzae BLS256
Genome accession: NC_017267
Putative virulence/resistance : Virulence
Product : DNA mismatch repair protein MutS
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3500645 - 3503260 bp
Length : 2616 bp
Strand : +
Note : -

DNA sequence :
GTGACTGTTTCCTCAGATATTTCCAAGCCTGGCAAGGCCACTCAAGAACACACGCCGCTGATGAAGCAATTCTTCGCAGC
CAAATCGGACTACCCCGATCTGCTGCTGTTCTTCCGCATGGGCGATTTCTACGAGTTGTTCTACGACGACGCGCGCAAGG
CGGCGCAGCTGCTCGACATCACCCTGACCCAGCGCGGCAGCTCCGGCGGTGCCCCAATTCCCATGGCCGGGGTGCCGGTG
CATGCGTATGAAGGTTATCTGGCACGCTTGGTGGCACTGGGCGAGTCGGTGGCGATCTGCGAGCAGATCGGCGATCCGGC
GCTGGCCAAGGGGCTGGTCGAGCGCAAAGTAGTGCGTATCGTCACGCCAGGCACGGTCACCGACGAGGCGCTGCTGGACG
AGCGCCGCGACACGCTGTTGATGGCGATTTCGCGCAGCAAACAAGGTTACGGCCTGGCCTGGGCCGATCTGGCCGGTGGA
CGCTTTTTGGTCAACGAAGTGGACAGCGTGGATGCGCTGGAAGCGGAGATCGCGCGCCTGGAACCTGCCGAGCTGTTGGT
GCCCGACGAAGACCACTGGCCTGAATTCCTGCGCGGGCGCATTGGCGTGCGGCGTCGACCGCCGTGGTTGTTCGATGCCG
ACAGCGGGCGCCGTCAGCTGCTGGCGTTCTTCAAACTGCACGATCTGTCCGGCTTCGGCATCGACGACAAACCCTGCGCC
ACGGCCGCCGCCGGCGCGCTGCTGGGCTATGTCGAAGAAACCCAGAAACAGCGCCTGCCGCATCTGACCTCAATCGCGAT
GGAAGTGGCCAGCGAGGCGATCTCGATGAACGCGGCCACGCGCCGGCATCTGGAGCTGGACACGCGTGTGGATGGCGACA
CCCGCAACACCTTGCTCGGTGTGCTGGACAGCACGGTCACGCCGATGGGCGGGCGTTTGCTGCGGCGTTGGCTGCACCGT
CCGCTGCGCCTGCGCGATGTGCTGGTGCAGCGCCATCATGCGGTCGGCACCTTGATCGATGCCGGTGCCGATGCAGACCT
GCGCGAAGCCTTCCGTGCGCTCGGCGATCTGGAACGCATCCTCACCCGCGTGGCGCTGCGCTCGGCGCGGCCGCGCGATT
TTTCCACCTTGCGCGATGGCCTGGCGCTGTTGCCGAAGGTGCGCACGATCCTGGCACCACTGGATTCGCCGCGCCTGCAG
ACGCTGCACGCCGAACTCGGCGAGCACGATGCCACTGCGCATCTGTTGATCAGCGCAGTGGCCGAAACGCCGCCGCTCAA
GCTCAGCGATGGCGGCGTCATCGCCAGCGGTTACGACGCCGAACTGGATGAGCTGCGCCGCCTGTCCACCAATGCCGATC
AATTCCTGATCGACCTGGAACAACGCGAGCGCGCCAGCAGCGGCATCGCCACGCTCAAGGTCGGCTACAACCGCGTGCAC
GGCTACTACATCGAGATCAGCAAGGGCCAGGCCGAAAAAGCGCCGCTGCACTATAGCCGCCGGCAGACGTTGACCAACGC
CGAGCGCTACATCACCGAAGAACTCAAGACGTTCGAAGACAAGGTGCTGTCCGCGCGCGAGCGTTCGCTATCGCGCGAAA
AATTGCTGTACGAAGGCCTGCTCGACGCGCTTGGCACCGAGCTGGAAGGCCTCAAGCGCTGCGCGGGCGCACTCAGCGAA
CTGGATGTCTTGGCCGGCTTTGCCGAACGCGCGCAGGCGCTGGATTGGTCGCAGCCAGAGCTGGATAGCGCACCCTGTCT
GCGTATCGAACGCGGCCGTCACCCGGTGGTGGAAGCGGTGCGCGACCACCCGTTCGAGCCCAACGATCTGGACCTGCACA
GCGACCGCCGCATGCTGGTGATCACCGGCCCGAACATGGGCGGCAAGTCGACCTACATGCGCCAGAACGCGTTGATCGTG
TTGTTGGCGCATATCGGCAGCTACGTGCCGGCCAGCCGGGCGGTGATCGGGCCAATCGACCGCATCCTCACCCGCATCGG
CGCTGGCGACGACCTGGCGCGCGGGCAATCCACCTTCATGGTGGAAATGGCCGAAACCAGCTACATCCTGCATCACGCCA
CGCCGCAATCGCTGGTGCTGATGGACGAGATCGGCCGTGGCACCTCCACCTACGATGGTCTGGCCTTGGCCGATGCGGTC
GCACGTCATCTGGCGCACACCAATCGCTGCTACACACTGTTTGCCACGCATTATTTCGAGCTCACTGCGCTCGCCGACGA
ATCGCATGCCGGTGGCGCCAGTGGCATCGCCAATGTGCATCTGGACGCGGTCGAACACGGCGAGCGCCTGGTGTTCATGC
ACGCAGTGAAAGATGGCCCGGCCAATCGCAGTTTCGGTCTGCAAGTGGCTGCGCTGGCCGGCCTGCCCAAGGCCGCGGTG
ACGCAGGCGCGGCGACGCTTGGTGGAGTTGGAACAACGCGGCGGCGAAAGCCACAGCGCGCAGATGGCGCCCACCGCGCT
GGATGCGCCGCAACAGTTCGGGCTGTTCACCGCACCCTCCTCCGCTGCGCAGGAAGCGTTGCAGGCACTGGATCCGGACG
AGCTCACGCCCAAGCAGGCGCTGGAAGCGCTGTATCGGTTGAAGGCATTGCTTTGA

Protein sequence :
MTVSSDISKPGKATQEHTPLMKQFFAAKSDYPDLLLFFRMGDFYELFYDDARKAAQLLDITLTQRGSSGGAPIPMAGVPV
HAYEGYLARLVALGESVAICEQIGDPALAKGLVERKVVRIVTPGTVTDEALLDERRDTLLMAISRSKQGYGLAWADLAGG
RFLVNEVDSVDALEAEIARLEPAELLVPDEDHWPEFLRGRIGVRRRPPWLFDADSGRRQLLAFFKLHDLSGFGIDDKPCA
TAAAGALLGYVEETQKQRLPHLTSIAMEVASEAISMNAATRRHLELDTRVDGDTRNTLLGVLDSTVTPMGGRLLRRWLHR
PLRLRDVLVQRHHAVGTLIDAGADADLREAFRALGDLERILTRVALRSARPRDFSTLRDGLALLPKVRTILAPLDSPRLQ
TLHAELGEHDATAHLLISAVAETPPLKLSDGGVIASGYDAELDELRRLSTNADQFLIDLEQRERASSGIATLKVGYNRVH
GYYIEISKGQAEKAPLHYSRRQTLTNAERYITEELKTFEDKVLSARERSLSREKLLYEGLLDALGTELEGLKRCAGALSE
LDVLAGFAERAQALDWSQPELDSAPCLRIERGRHPVVEAVRDHPFEPNDLDLHSDRRMLVITGPNMGGKSTYMRQNALIV
LLAHIGSYVPASRAVIGPIDRILTRIGAGDDLARGQSTFMVEMAETSYILHHATPQSLVLMDEIGRGTSTYDGLALADAV
ARHLAHTNRCYTLFATHYFELTALADESHAGGASGIANVHLDAVEHGERLVFMHAVKDGPANRSFGLQVAALAGLPKAAV
TQARRRLVELEQRGGESHSAQMAPTALDAPQQFGLFTAPSSAAQEALQALDPDELTPKQALEALYRLKALL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
mutS AAA80578.1 DNA mismatch repair protein Virulence SPI-1 Protein 0.0 53

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
mutS YP_005629669.1 DNA mismatch repair protein MutS VFG0562 Protein 0.0 55