Gene Information

Name : XOC_3079 (XOC_3079)
Accession : YP_005629345.1
Strain : Xanthomonas oryzae BLS256
Genome accession: NC_017267
Putative virulence/resistance : Unknown
Product : transposase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3145818 - 3146810 bp
Length : 993 bp
Strand : -
Note : -

DNA sequence :
ATGACGCAGCTGACCTTCTCTGACGCCGAGTATGCGGGCAAGCGCAAGCAGACGCGGCGCGAGGTGTTTTTGGCGCAAAT
GGAGCAGGTGGTGCCGTGGTCGGCACTGCAGGAGCAGATCGCGCCGCACGATCCGAAGGCCGGTCGCGGTCGGCATCCAT
ATCGCCTGGAGACGATGCGGCGCATCCACCTGATGCAGCAGTGGTACGCGCTGAGCGATCCGGCGATGGAGGAAGCATTG
TACGAAATCGTCTCGATGCGCCTGTTCGCTGGCTTGCAGTCGAGCAAGTCGATTCCGGATGAGACGACGATCTTGAATTT
CCGTCACCTGCTGGAAGAGCACGGGCTGGGGCTGAAGTTGTTGGAGACGGTCAACGCGCATCTGGTGGGGCGGGGTCTGA
TGATGCGCCAGGGCACGATGGTGGACGCGACGATCCTCAACGCACCCAGCTCGACCAAGAACAAACAAGGCGAGCGCGAT
ACGGAAATGCACCAGACCAAGAAAGGCAACCAGTATTACTTTGGAATGAAGGCGCACATCGGCACTGATCGCGACTGGGG
TCTGGTGCACACGGTGGTGGGGACGGCGGCGAACGTGGCCGATGTGACGGTGACGGCGCAGTTGCTGCACGGGCAGGAGA
GCCAAGTGTTTGCCGACGCCGGCTATACGGGTGCGAACAAGCGTGACGAGCTGAAGGACAAGGAGATCGAATGGGAAATT
GCTACGCGGCGCAGCAAGCTCAAGGCGTTGGTCGATGGCCCGGTGAAGCAGGCTTGGCGGCACCTGGAAACGTTGCGTGC
GCAGGTACGGGCACGGGTTGAGCATCCGTTTCGGGTGATCAAACAGCAGTTTGGTCACGGCAAGGTGCGTTACCGGGGCT
TGCGCAAGAACACCTCGCAGCTGCAGGTGATGTTTGCGCTGGCCAACCTGTTGCTGGTGCGCAAGCGGTTGTTGGCCTGG
CCAGGACAGGTGTGCCTGGAAATCGGAAAGTAA

Protein sequence :
MTQLTFSDAEYAGKRKQTRREVFLAQMEQVVPWSALQEQIAPHDPKAGRGRHPYRLETMRRIHLMQQWYALSDPAMEEAL
YEIVSMRLFAGLQSSKSIPDETTILNFRHLLEEHGLGLKLLETVNAHLVGRGLMMRQGTMVDATILNAPSSTKNKQGERD
TEMHQTKKGNQYYFGMKAHIGTDRDWGLVHTVVGTAANVADVTVTAQLLHGQESQVFADAGYTGANKRDELKDKEIEWEI
ATRRSKLKALVDGPVKQAWRHLETLRAQVRARVEHPFRVIKQQFGHGKVRYRGLRKNTSQLQVMFALANLLLVRKRLLAW
PGQVCLEIGK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tnp-33 AAN62255.1 transposase Not tested PAGI-3(SG) Protein 2e-79 63
PSPTO_1407 YP_003355052.1 ISPssy transposase or derivative Not tested Hrp PAI Protein 8e-59 60
tnpA AAF71487.1 TnpA Not tested Hrp PAI Protein 6e-59 60
unnamed AAO33449.1 putative transposase Not tested Not named Protein 7e-47 55
tnpA ACF06175.1 putative transposase Not tested Tn5036-like Protein 3e-51 49
tnpA ACF06178.1 putative transposase Not tested Tn5036-like Protein 3e-51 49