Gene Information

Name : glnA (XOC_0293)
Accession : YP_005626699.1
Strain : Xanthomonas oryzae BLS256
Genome accession: NC_017267
Putative virulence/resistance : Virulence
Product : glutamine synthetase, type I
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 289465 - 290874 bp
Length : 1410 bp
Strand : +
Note : -

DNA sequence :
ATGTCCGTGGAAAATGTTGAAAAGCTGATCAAGGACAACAAGGTCGAGTTCGTCGACCTGCGCTTCGTCGATATGCGTGG
TGTACAGCAGCACATCACCTTTCCGGCCAATATCATCGAGCCGGCGCTGTTTGAAGAAGGCAAGATGTTCGACGGCAGTT
CGATCGCGGGGTGGAAGGGCATCAACGAGTCGGACATGGTGCTGCTGCCGGACGCAGGCACCGCGTATCTGGATCCGTTC
TTCGCCGATCCGACCATCGTGCTGACCTGCGACATCCTCGACCCGGCCACCATGCAGAGCTATGAGCGCGATCCGCGCGG
CATCGCCAAGCGCGCCGAGGCCTATCTGAAGTCGTCCGGCACCGCCGACCAGGCGTTCTTCGGCCCGGAGCCGGAATTCT
TCATCTTCGATTCGGTGCGCTTTGCCAACGACATGGGCCACACCTTCTTCCAGGTGGGTTCGGAAGAAGCGGCCTGGAAT
ACCGGTGAAAAGTACGACGGCGGCAATAGCGGCTACCGTCCGGGCGTGAAGGGCGGCTACTTCCCGGTTCCGCCGACTGA
CACCCTGCACGACCTGCGCGCGGAAATGATCAAGACGCTTGAGCAGGTCGGCATCGAAACCGAAGTGCACCACCACGAAG
TGGCCACCGCCGGTCAGTGCGAAATCGGCACCAAGTTCAGCTCGCTGGTGCAGAAGGCCGACGAACTGCTGACGATGAAG
TACATCATCAAGAACGTCGCCTACCGCAACGGCAAGACCGCCACCTTCATGCCCAAGCCCATCGTGGGCGACAACGGCTC
GGGCATGCACGTGCACCAGTCGCTGGCCAAGGGCGGCGTCAACCTGTTCACCGGCGACGGCTACGGCGGTTTGTCGCAGC
TGGCGCTGTGGTACATCGGCGGCATCTTCAAGCACGCCCGCGCTATTAACGCCTTCGCCAACTCCGGCACCAACAGCTAC
AAGCGTCTGGTTCCGGGCTTTGAGGCACCAGTGATGCTGGCCTATTCGGCGCGTAACCGCTCGGCGTCGTGCCGCATTCC
GTGGGTCACCAACCCGAAGGCGCGCCGCATCGAAATGCGCTTCCCCGATCCGTTGCAGTCCGGCTACCTGACCTTCACCG
CGCTGATGATGGCCGGCCTGGACGGCATCAAGAACCAGATCGACCCGGGCGCACCGAGCGACAAGGACCTGTACGACCTG
CCGCCGGAAGAAGAGAAGCTGATTCCGCAGGTCTGCTCCAGCCTGGATCAGGCCCTGGACGCGCTGGACAAGGACCGCGA
GTTCCTCAAGGCCGGCGGCGTGATGAGCGACGACTTCATCGACGGCTATATCGCGCTGAAGATGCAGGAAGTCACCAAGT
TCCGTGCTGCGACCCACCCGTTGGAATACCAGCTGTACTACGGCAACTGA

Protein sequence :
MSVENVEKLIKDNKVEFVDLRFVDMRGVQQHITFPANIIEPALFEEGKMFDGSSIAGWKGINESDMVLLPDAGTAYLDPF
FADPTIVLTCDILDPATMQSYERDPRGIAKRAEAYLKSSGTADQAFFGPEPEFFIFDSVRFANDMGHTFFQVGSEEAAWN
TGEKYDGGNSGYRPGVKGGYFPVPPTDTLHDLRAEMIKTLEQVGIETEVHHHEVATAGQCEIGTKFSSLVQKADELLTMK
YIIKNVAYRNGKTATFMPKPIVGDNGSGMHVHQSLAKGGVNLFTGDGYGGLSQLALWYIGGIFKHARAINAFANSGTNSY
KRLVPGFEAPVMLAYSARNRSASCRIPWVTNPKARRIEMRFPDPLQSGYLTFTALMMAGLDGIKNQIDPGAPSDKDLYDL
PPEEEKLIPQVCSSLDQALDALDKDREFLKAGGVMSDDFIDGYIALKMQEVTKFRAATHPLEYQLYYGN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
glnA YP_003728749.1 glutamine synthetase Not tested cag PAI Protein 3e-106 50

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
glnA YP_005626699.1 glutamine synthetase, type I VFG1399 Protein 1e-108 51