Gene Information

Name : XOC_2649 (XOC_2649)
Accession : YP_005628926.1
Strain : Xanthomonas oryzae BLS256
Genome accession: NC_017267
Putative virulence/resistance : Unknown
Product : RNA binding S1
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2722067 - 2724427 bp
Length : 2361 bp
Strand : -
Note : -

DNA sequence :
ATGCACGATAGCCAGCTTGCCCATCAGATTGCTCGCACCATCGCCGACGAGATCGGTGCTCAGCCCGCCCAGGCGCGCGC
CGCCATTGCCCTGCTGGATGAGGGCGCCAGCGTCCCGTTCATTGCGCGCTACCGCAAGGAAGTCACCGGCGGGCTGGACG
ATACCCAGTTGCGCAATCTGGAAACGCGCCTGACCTACCTGCGCGAGCTGGAAGAACGCCGCGCGGTGATCCTGTCCAGC
ATCGGCGAGCAGGGCAAGCTCAGCGACGAACTGCGCGACGAAATTGTGGCCGCCGATACCAAGTCGCGGCTGGAAGATCT
GTATCTGCCCTACAAGCCCAAGCGCCGCACCCGCGCGCAGATCGCGCGCGAAGCCGGATTGGAGCCATTGGCCGATGGCC
TGTTGTCGGACCCGACACAGACGCCGGAAGTCGCCGCGGCCGCCTTCATCGATGCCGAAAAGGGCGTTGCCGACAGCAAG
GCCGCGCTGGAAGGCGCGCGCGCCATCCTGATGGAGCGCTGGGGCGAAGACGCCGCACTGGTCGGTGAGCTGCGCAGCTG
GCTGAGCGACAATGGCGTGATCCGCTCGCGCGTGGCCGAGGGCAAGGAAGAGGCCGGTGCCAAGTACCGCGACTACTTCG
ATCACGCCGAATCGCTGGCGAAGATTCCGTCGCACCGCTTGCTGGCGCTGTTTCGCGCGCGACGTGAGGAGTTTCTCTAT
CTGGATCTCGATCCGGGCAGCGATGCCGAGGCTGGGCATCAGTATGCCGAAGGCCGGGTGGCGCGCAGTGCCGGTATTTC
CAATGAAGGCCGCCCGGCCGATCGCTGGTTGCTGGATGCCTGCAGGCTGACCTGGCGCGCCAAGCTGCACATGCATCTGC
TGCTGGACCTGTTCAACCAGGCGCGCGAAAAGGCCGAGGCCGAGGCGATCGCGGTGTTCGGCGACAACCTCAAGGATCTG
ATGCTGGCGGCGCCGGCCGGCCCGCGCGTGGTGCTGGGGCTGGACCCGGGCATCCGTACCGGTTGCAAGATCGCCGTGGT
CGATGCCACCGGCAAGCTCGTGGCCACCGAAACGATTTATCCGCACGAGCCCAAGCGGCAGTGGGATCAGTCGCTGCAGA
CCATCAAAAAGTTGTGCATGCAGCACAACGTGGAGCTGATCGCGATCGGCAACGGGACTGCCAGCCGCGAGACCGACAAG
CTCGCCGGCGAAGCGATTGCGCTGTGCGGCGCTGCCAAGTTGCAGAAGGTTGTGGTCAGCGAGGCGGGCGCGTCGGTGTA
TTCGGCGTCGGAGTTCGCGGCCAAGGAGTTCCCCAATCTGGACGTGTCGCTGCGTGGTGCGGTGTCGATCGCGCGTCGTC
TGCAGGATCCATTGGCCGAGCTGGTAAAGATCGAGCCCAAGGCAATCGGCGTGGGCCAATACCAGCACGATGTCGATCAG
TATCGTTTGGCCAAGGCGCTGGAAGCGCGTGTGGAAGACTGCGTCAACGCGGTCGGTGTGTACGTCAATACCGCCTCGGC
GGCGCTGCTGTCGCGCGTGTCCGGGCTGTCGAGCACGGTGGCGGAAAATATCGTGCGTCACCGCGACGACAACGGCCCGT
TCAAGCGTCGCAAGGACTTGCTCAAGGTGCCGCGATTGGGCGACAAGACCTTCGAACAATGCGCCGGCTTCCTGCGCATT
GCTGATGGCGACGAGCCGCTGGACGTGTCGGCGGTGCATCCGGAAGCCTATCCGGTGGTCGAGCGCATCGTCGGCAGCAC
CGGCAAGCCGATCAAGGCATTGCTGGGCGACGGCAGTTTTCTGCGCGGCCTGAAGCCGGAGATGTTCACCGACGAGCAAT
TCGGTGTGCCAACCGTGCGCGACATTCTCAAAGAGCTGGAAAAACCCGGCCGCGATCCGCGTCCGCAGTTCAAGGCAGCG
CAGTTCGCCGAAGGCATTGAGGACATCAAGCACCTCAAGCCCGGCATGGTGCTCGAAGGGGTGGTCAGCAACGTGGCCGC
GTTCGGCGCGTTCGTCGATATCGGCGTGCACCAGGATGGTTTGGTGCACATCTCGGCGTTGTCGGAGACCTTCGTCAAGG
ATCCGCGCGACGTGGTCAAGGCCGGCGACATCGTCAAGGTCAAGGTGCTGGAAGTGGATGTGGCGCGCAAGCGCATCGCG
CTGAGCTGCCGTTTGTCCGATACGCCGGCACCGACCGATGGCTCAGCGCAACCGCGCGAGGCTCGCGGCAACGGTCCGGG
GCAGGGCAGGCGCGACGGTAGTGGGCACGTTCAGGCGCAAGCCAACAGCAAACCGCGGATCACCGCGCCGCCGGCCGATA
ATGCGCTGGCAGAGGCGTTTGCACGTGCTAAGCGTAGCTAA

Protein sequence :
MHDSQLAHQIARTIADEIGAQPAQARAAIALLDEGASVPFIARYRKEVTGGLDDTQLRNLETRLTYLRELEERRAVILSS
IGEQGKLSDELRDEIVAADTKSRLEDLYLPYKPKRRTRAQIAREAGLEPLADGLLSDPTQTPEVAAAAFIDAEKGVADSK
AALEGARAILMERWGEDAALVGELRSWLSDNGVIRSRVAEGKEEAGAKYRDYFDHAESLAKIPSHRLLALFRARREEFLY
LDLDPGSDAEAGHQYAEGRVARSAGISNEGRPADRWLLDACRLTWRAKLHMHLLLDLFNQAREKAEAEAIAVFGDNLKDL
MLAAPAGPRVVLGLDPGIRTGCKIAVVDATGKLVATETIYPHEPKRQWDQSLQTIKKLCMQHNVELIAIGNGTASRETDK
LAGEAIALCGAAKLQKVVVSEAGASVYSASEFAAKEFPNLDVSLRGAVSIARRLQDPLAELVKIEPKAIGVGQYQHDVDQ
YRLAKALEARVEDCVNAVGVYVNTASAALLSRVSGLSSTVAENIVRHRDDNGPFKRRKDLLKVPRLGDKTFEQCAGFLRI
ADGDEPLDVSAVHPEAYPVVERIVGSTGKPIKALLGDGSFLRGLKPEMFTDEQFGVPTVRDILKELEKPGRDPRPQFKAA
QFAEGIEDIKHLKPGMVLEGVVSNVAAFGAFVDIGVHQDGLVHISALSETFVKDPRDVVKAGDIVKVKVLEVDVARKRIA
LSCRLSDTPAPTDGSAQPREARGNGPGQGRRDGSGHVQAQANSKPRITAPPADNALAEAFARAKRS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
NMB0075 NP_273139.1 transcriptional accessory protein Tex Not tested IHT-A Protein 0.0 60