Gene Information

Name : lolD (XOC_2596)
Accession : YP_005628878.1
Strain : Xanthomonas oryzae BLS256
Genome accession: NC_017267
Putative virulence/resistance : Resistance
Product : lipoprotein releasing system, ATP-binding protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2667004 - 2667738 bp
Length : 735 bp
Strand : -
Note : -

DNA sequence : 
ATGAATGAGATCCGGGAAGCGGTTGTGCAAAAACCAGAACAGGCAACTGCGGTCATTCGCGCCGAGGCGCTGGCCAAGAC
CTACGCCGAAGGCAAGATGCGCACGCCGGTATTCGATGGCCTGGATCTATCGGTGGCGACCGGCGAAACCGTGGCGATCG
TCGGCGCTTCCGGTGCCGGCAAGAGCACCTTGCTGCATCTGCTCGGCGGGTTGGATATTCCGACCGCGGGCGAAGTGTAT
GTAGCGGGTGAGCGCATGTCGGCGCTGTCCGACGCACAGCGCGGCAAGCTACGCAATCAGTCGCTTGGCTTTGTGTATCA
GTTCCACCACCTGTTACCCGAATTCACCGCGCTGGAAAACGTGATGATGCCGGTGCTGCTGTCTGGCAAAGACGTGGCCG
TCGCCAAAGGACAGGCGCTGCAATTGTTGGAATCGGTCGGGCTCGGGCATCGTATCGACCACAAGCCCAGTGAACTGTCG
GGCGGCGAGCGTCAACGCTGTGCCGTGGCGCGTGCACTGGTCAACAAGCCCGGCTGCGTGTTGGGCGACGAGCCCACCGG
CAACCTCGACGACAAGACCGCGGGCACGGTGTTTGAGCTGATGCTGGAGCTCAATCGTGCCCAGCGCACCAGCCTGGTCT
TGGTGACGCACGACCGTGGCTTGGCACGGCGCCTGGACCGCGTCCTGGAGTTGCATCAAGGAAAGCTGCGGGAACTGGCG
CCGTCTGCGGTGTAA

Protein sequence : 
MNEIREAVVQKPEQATAVIRAEALAKTYAEGKMRTPVFDGLDLSVATGETVAIVGASGAGKSTLLHLLGGLDIPTAGEVY
VAGERMSALSDAQRGKLRNQSLGFVYQFHHLLPEFTALENVMMPVLLSGKDVAVAKGQALQLLESVGLGHRIDHKPSELS
GGERQRCAVARALVNKPGCVLGDEPTGNLDDKTAGTVFELMLELNRAQRTSLVLVTHDRGLARRLDRVLELHQGKLRELA
PSAV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-27 42
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 4e-29 42
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 4e-29 42
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 4e-29 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
lolD YP_005628878.1 lipoprotein releasing system, ATP-binding protein NC_012469.1.7686878. Protein 6e-38 43
lolD YP_005628878.1 lipoprotein releasing system, ATP-binding protein NC_008702.1.4606598. Protein 2e-30 42