Gene Information

Name : kdsB (XOC_2587)
Accession : YP_005628869.1
Strain : Xanthomonas oryzae BLS256
Genome accession: NC_017267
Putative virulence/resistance : Virulence
Product : 3-deoxy-D-manno-octulosonate cytidylyltransferase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2657977 - 2658756 bp
Length : 780 bp
Strand : -
Note : -

DNA sequence :
ATGACACTCACCCCCCCTGCCGATTTCGTCGTCGCCATTCCCGCCCGTTACGCGTCTACGCGGCTGCCCGGCAAGCCGCT
GCAACGGATCGGCGATCGCCCGATGATCCAGCACGTGGCCGAGCGTGCGTTGCTGGCGGGTGCGCGCGCAGTGTGGGTGG
CCACCGACGATGCGCGCATCGCCGAGGCGATCGCGCATCTGCCAGGCGTGCATGTGGCGATGACCGGCACTGCGCATCTT
TCCGGCACCGACCGCCTTGCCGAGTGCGCACGCATTGCCGGCTGGGACGAACAGACCTGCGTGGTCAATCTGCAAGGCGA
CGAGCCGTTCGCGCCGGCCGCCGGCATCGGCGCGGTTGCCGATCTGTTGCAGCACTCCGGTGCCGAGATGGCCACGCTTG
CCGCGCCGGTGGACAGCGCGCACGACCTGTTCGATCCCAACGTGGTGAAGCTGGTGCGCAACGCTCGCGGCGATGCGCTG
TATTTCAGTCGTGCGCCGATTCCCTGGCACCGCGACAGCTTCGCCAGCCAGCGCGACAGCGTGCCTGCAGAAGGTCAGTG
GCTGCGCCACATCGGCATCTACGGCTATCGCGCGGGCTTCCTGCAGCGCTTCGCGGCGATGCCGCCCGGCATGCTGGAGC
GCATCGAATCGCTGGAACAATTGCGTGTGATGGAAGCTGGCTATCGCATTGCCGTGGCGGTGACGCCTGAGCCGTTTCCG
CCGGGCATCGACACCCTGGACGATCTCGCCCGCGCGCAGGCACGGGTGGCGTCGGCATGA

Protein sequence :
MTLTPPADFVVAIPARYASTRLPGKPLQRIGDRPMIQHVAERALLAGARAVWVATDDARIAEAIAHLPGVHVAMTGTAHL
SGTDRLAECARIAGWDEQTCVVNLQGDEPFAPAAGIGAVADLLQHSGAEMATLAAPVDSAHDLFDPNVVKLVRNARGDAL
YFSRAPIPWHRDSFASQRDSVPAEGQWLRHIGIYGYRAGFLQRFAAMPPGMLERIESLEQLRVMEAGYRIAVAVTPEPFP
PGIDTLDDLARAQARVASA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
kpsU YP_854332.1 3-deoxy-manno-octulosonate cytidylyltransferase Not tested PAI I APEC-O1 Protein 8e-36 45
kpsU AAZ04469.1 CMP-KDO synthetase Virulence PAI I APEC-O1 Protein 6e-36 45
kpsU CAE85213.1 KpsU protein Virulence PAI V 536 Protein 5e-37 45