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Name : XOC_2570 (XOC_2570) Accession : YP_005628857.1 Strain : Xanthomonas oryzae BLS256 Genome accession: NC_017267 Putative virulence/resistance : Virulence Product : VI polysaccharide biosynthesis protein VipA-tviB Function : - COG functional category : - COG ID : - EC number : - Position : 2623570 - 2624862 bp Length : 1293 bp Strand : - Note : - DNA sequence : ATGTCCGGCCACACGCATCTCGCACCGCCACCAGGGCGCATCGCCGTCATCGGCTTAGGCTATGTCGGCCTGCCGCTGGC GGTTGCATTCGGTGAGCAGCGCGACACCCTGGGCTTCGACATCGATGCGCAGCGTGTTGCGCAATTGCGCGATGGCCACG ATGCCACGCTGGAACTGGACGAGACCGAGTTGGCTGCGGCAACGCAGGTGCGCTACGCCGCAGACGCGGCGGACCTGGCT TCGTGCAGCATCTTCATCGTGACCGTGCCGACGCCGATCGACAGCTTCGAGCAACCGGATCTGGAGCCGCTGCGCAGTGC CACTGCGTTGATTGCTGCTGCACTCAAGCCCGGCGATCTGGTGATCTACGAATCCACGGTCTATCCCGGCACCACCGAAG AAGTTTGCGTGCCCTTGCTAGAAGCAGCCTCCGGGCTGCGCTTCAACCACGATTTCTTCTGTGGCTACAGCCCCGAGCGC GTCAATCCGGGCGATCGCCAGCGGCGTCTGCGCCACATCCGCAAGATCACTTCCGGCTCGACGCCCGAGGCCGCTGATGC GGTCGATGCGCTGTACACCAGCATCATTACCGCTGGCACCTGGCGCGCCCCGTCGATGCGCGTGGCCGAAGCGGCAAAGG TGGTCGAGAACATTCAGCGCGACGTCAATATCGCGCTGGTGAACGAACTGGCGTTGATCTTCGACAAGCTGGGAATCGAC ACGCTCGATGTGCTCGAAGCCGCGGGAACCAAGTGGAATTTCCTGCCGTTTCGTCCTGGCCTGGTCGGCGGGCATTGCAT CGGGGTGGATCCGTATTACCTGATGCACAAATCCCAAAGCGTGGGCTATCACCCCGACCTGATCCACACCGCGCGGCAGG TCAACAATCGCGTCGGCCGCCATGTGGCCGAGCGCGTCTGCGGCATGCTGGCCATGCGGGGCATCGCGCTCGCGCAGGCG AGGGTGCTGGTACTGGGCGCTACCTTCAAGGAGAACTGCCCGGATCTGCGCAACAGCCGCGCCCTGGAATTGGTGCACTT GCTGCAGGCCGCGGGGGTGCAGGTGGACACCTGCGACCCGTGGGCAGACCCGGTGGAGGCGCTGCAGCACAGCGGCGTGC AGCTCTGCGAGACGCCCCAGGACGGCGCCTACGACGCCGTGGTGCTGGCGGTGGCGCATGCGCAGTATCGCGCCTACGAC GCCGCGCGCATTGCCGCGCTCGGCAAACCGGGCGCGGTGGTCTACGACGTCAAATCGACGTGGCCGCGTGCGGCTGTCAG CGATCGTCTGTAG Protein sequence : MSGHTHLAPPPGRIAVIGLGYVGLPLAVAFGEQRDTLGFDIDAQRVAQLRDGHDATLELDETELAAATQVRYAADAADLA SCSIFIVTVPTPIDSFEQPDLEPLRSATALIAAALKPGDLVIYESTVYPGTTEEVCVPLLEAASGLRFNHDFFCGYSPER VNPGDRQRRLRHIRKITSGSTPEAADAVDALYTSIITAGTWRAPSMRVAEAAKVVENIQRDVNIALVNELALIFDKLGID TLDVLEAAGTKWNFLPFRPGLVGGHCIGVDPYYLMHKSQSVGYHPDLIHTARQVNNRVGRHVAERVCGMLAMRGIALAQA RVLVLGATFKENCPDLRNSRALELVHLLQAAGVQVDTCDPWADPVEALQHSGVQLCETPQDGAYDAVVLAVAHAQYRAYD AARIAALGKPGAVVYDVKSTWPRAAVSDRL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| tviB | NP_458740.1 | Vi polysaccharide biosynthesis protein, UDP-glucose/GDP-mannose dehydrogenase | Virulence | SPI-7 | Protein | 5e-110 | 51 |
| tviB | NP_807945.1 | VI polysaccharide biosynthesis UDP-glucose/GDP-mannose dehydrogenase | Virulence | SPI-7 | Protein | 5e-110 | 51 |
| cap1L | AAA64651.1 | type 1 capsule synthesis gene | Virulence | SCCcap1 | Protein | 3e-95 | 49 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| XOC_2570 | YP_005628857.1 | VI polysaccharide biosynthesis protein VipA-tviB | VFG0431 | Protein | 2e-110 | 51 |
