Gene Information

Name : XOC_2200 (XOC_2200)
Accession : YP_005628507.1
Strain : Xanthomonas oryzae BLS256
Genome accession: NC_017267
Putative virulence/resistance : Unknown
Product : IS1403 transposase, IS3 family
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2197681 - 2197944 bp
Length : 264 bp
Strand : +
Note : -

DNA sequence :
GTGAAGAAGCGTTTTTCCGAAGAGCAGATCATCGGCTTCCTGCGCGAAGCCGAGGCCGGCATGCCGATCAAAGACCTGTG
CCGACGGCATGGCTTCAGTGAGGCGTCCTACTACCTGTGGCGCAGCAAGTTCGGCGGCATGAGCGTGCCCGATGCCAAGC
GGCTCAAGGACCTGGAGGCCGAGAACACGCGACTGAAGAAGTTGCTGGCCGAGCAGGTGTTCCAGAACGCCCTGATCAAG
GATGCGCTGCAAAAAAAATGGTGA

Protein sequence :
MKKRFSEEQIIGFLREAEAGMPIKDLCRRHGFSEASYYLWRSKFGGMSVPDAKRLKDLEAENTRLKKLLAEQVFQNALIK
DALQKKW

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAK01522.1 transposase A Not tested PAGI-1 Protein 6e-25 70
unnamed ABR13351.1 insertion sequence IS407 OrfA Not tested PAGI-5 Protein 3e-25 70
unnamed ABR13539.1 insertion sequence IS407 OrfA Not tested PAGI-8 Protein 3e-25 70
EXA9 ABD94680.1 IS407 transposase OrfA Not tested ExoU island A Protein 2e-25 70
trp1400A CAB46581.1 IS1400 transposase A Not tested HPI Protein 1e-17 50
XCV0438 YP_362169.1 ISRSO12 transposase (fragment) Not tested Hrp PAI Protein 7e-16 42
tnp AAL78293.1 putative truncated transposase Not tested Hrp PAI Protein 5e-16 42