Gene Information

Name : XOC_1967 (XOC_1967)
Accession : YP_005628285.1
Strain : Xanthomonas oryzae BLS256
Genome accession: NC_017267
Putative virulence/resistance : Unknown
Product : IS1403 transposase, IS3 family
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1940178 - 1940936 bp
Length : 759 bp
Strand : +
Note : -

DNA sequence :
ATGAGCGCCAGTGCGCTGTGCTATCGCCCGCGCGAGGACCGCAACGTTGAGTTGCGCGAGCGCATCCTTGCGTTGGCGCA
TCGCCATCGCCGCTATGGCGTGGGGATGATCTCTCTCAAGCTGCGGCAGGAAGGGCGTCTGGTGAACTATAAGCGGGTGG
AGCGGCGGTATTGCGAGCAGCAGCTGCAGGTCCGCCGCCGCACGCGTAAAAAGGTGCCGGTAGGCGAGCGTGCGCCGTTG
CTGCGGCCCACCAAGGCCAACCCGGTGTGGTCGATGGACGTCGTGTTCGACCGCACCGCCGAAGGCAGGGCAATCAAATG
CCTGGTGATCGTGGACGACGCAACCCACGAAGCGGTCGCCATCGACGTGGAGCGTGCGATCTCGGGACACGGCGTTGTGC
GCGTGCTGGATCGGTTGGCACACAGTCGCGGCCTGCCGAAGATGATTCGCACGGACAACGGCAAGGAGTTCTGTGGCAAG
GCCGTGGTCGCCTGGGCGCATGCCAATCGTGTGCAGCGACGCCAGATCCAGCCTGGCAAGCCGAACCAGAATGCCTACGT
CGAATCCTTCAACGGCCGGCGACGCGACGAATGCCTCAACGAACACTGGTTCCCAACGCTGCTGCATGCGCGCACCGAGA
TCGAACGCTGGCGCCGCGAATACAACGAACACCGCCCCAAGAAAGCAATCGGCGCAATGACGCCGGCGGCCTATGCCCAG
CAGTTGGCCCATAGCGATATCATCAACCCCGGACGCTAA

Protein sequence :
MSASALCYRPREDRNVELRERILALAHRHRRYGVGMISLKLRQEGRLVNYKRVERRYCEQQLQVRRRTRKKVPVGERAPL
LRPTKANPVWSMDVVFDRTAEGRAIKCLVIVDDATHEAVAIDVERAISGHGVVRVLDRLAHSRGLPKMIRTDNGKEFCGK
AVVAWAHANRVQRRQIQPGKPNQNAYVESFNGRRRDECLNEHWFPTLLHARTEIERWRREYNEHRPKKAIGAMTPAAYAQ
QLAHSDIINPGR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed ABR13352.1 insertion sequence IS407 OrfB Not tested PAGI-5 Protein 5e-46 53
unnamed ABR13540.1 insertion sequence IS407 OrfB Not tested PAGI-8 Protein 1e-52 50
XCV0439 YP_362170.1 ISRSO12 transposase (fragment) Not tested Hrp PAI Protein 1e-30 41