Gene Information

Name : smpB (XOC_1731)
Accession : YP_005628063.1
Strain : Xanthomonas oryzae BLS256
Genome accession: NC_017267
Putative virulence/resistance : Unknown
Product : SsrA-binding protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1711845 - 1712348 bp
Length : 504 bp
Strand : -
Note : -

DNA sequence :
ATGAGTAAGAAACCCACCAAGGATAAAGCAAACGGCGCGAAGGCCACCAAAACCATCGCGTTGAACAAGCGTGCGCGCCA
CGAATACCACCTGGAAGAACGCTACGAAGCTGGTCTGGCGCTGCAGGGCTGGGAAATCAAGGCGATCCGCGCCGGCCGCG
CCAACATCGTCGACGGTTACGCCTATGTCCGCTCCGGCGAGATCTATTTGATCGGCGCGCAGATTACCCCGCTGATTCAG
GCGTCCACCCACACCGTGCCGGTGGAACGCCGCGACCGCAAACTGCTGCTGCACCGGGCCGAGATCGACAAGGTACTCAC
CCGCGTGGAGCGCGAGGGCTACACCCTGGTGCCCACCGCGCTGTACTGGAGCAGCAACAAGGTCAAGCTGGAAATCGCCC
TGGCCAAGGGCAAGCAGAATCACGACAAGCGCGATGCCGCCAAGGACCGCGACTGGCAGCGCGACAAGCAGCGCGTGATG
CGGCGACATAACCGCGATGCGTGA

Protein sequence :
MSKKPTKDKANGAKATKTIALNKRARHEYHLEERYEAGLALQGWEIKAIRAGRANIVDGYAYVRSGEIYLIGAQITPLIQ
ASTHTVPVERRDRKLLLHRAEIDKVLTRVEREGYTLVPTALYWSSNKVKLEIALAKGKQNHDKRDAAKDRDWQRDKQRVM
RRHNRDA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
smpB NP_230495.1 SsrA-binding protein Not tested VPI-1 Protein 3e-41 53
unnamed AET14351.1 SsrA-binding protein Not tested SaPI68111 Protein 5e-21 43
smpB YP_001800894.1 SsrA-binding protein Not tested Not named Protein 3e-22 43