Gene Information

Name : XOC_1707 (XOC_1707)
Accession : YP_005628042.1
Strain : Xanthomonas oryzae BLS256
Genome accession: NC_017267
Putative virulence/resistance : Unknown
Product : IS1403 transposase, IS3 family
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1687179 - 1688165 bp
Length : 987 bp
Strand : +
Note : -

DNA sequence :
GTGGCGCAGCAAGTTCGGCGGCATGAGCGTGCCCGATGCCAAGCGGCTCAAGGACCTGGAGGCCGAGAACACGCGACTGA
AGAAGTTGCTGGCCGAGCAGGTGTTCCAGAACGACCTGATCAAGGATGCGCTGCAAAAAAAATGGTGAGCGCACCGGCGC
GTCGTGCGCTGGTGCGCGAGTGGATCGAAGGTGGCGCCAGCGAGCGCTGCGCCCTGGCAGCGATCGGCATGAGCGCCAGT
GCGCTGCGCGATCGCCCGCGCGAGGACCGCAACGTTGAGTTGCGCGAGCGCATCCTTGCGTTGGCGCATCGCCATCGCCG
CTATGGCGTGGGGATGATCTATCTCAAGCTGCGACAGGAAGGGCGTCTGGTGAACTATAAGCGGGTGGAGCGGTTGTATC
GCCAGCAGCAGCTGCAGGTCCGCCGCCGCACGCGTAAAAAGGTGCCGGTAGGCGAGCGTGCGCCGTTGCTGCGGCCCACC
AAGGCCAACCAGGTGTGGTCGATGGACGTCGTGTTCGACCGCACCGCCGAAGGCAGGGCAATCAAATGCCTGGTGATCGT
GGACGATGCAACCCACGAAGCGGTCGCCATCGGCGTGGAGCGTGCCATCTCCGGCCACGGCGTTGCGCGCGTGCTGGATC
GGTTGGCACACAGTCGTGGTCTGCCGAAGATGATCCGCACGGACAACGGCAAGGAGTTCTGTGGCAAGGCCATGGTCGCC
TGGGCGCATGCCAATCGTGTGCAGCGACGCCAGATCCAGCCTGGCAAACCGAACCAGAATGCCTACGTCGAATCCTTCAA
CGGCCGGCGACGCGACGAATGCCTCAACGAACACTGGTTCCCAACGCTGCTGCATGCGCGCACCGAGATCGAACGCTGGC
GCCGCGAATACAACGAACACCGCCCCAAGAAAGCAATCGGCGCAATGACGCCGGCGGCCTATGCCCAGCAGTTGGCCACT
AGCGATATCATCAACCCCGGACTCTAA

Protein sequence :
MAQQVRRHERARCQAAQGPGGREHATEEVAGRAGVPERPDQGCAAKKMVSAPARRALVREWIEGGASERCALAAIGMSAS
ALRDRPREDRNVELRERILALAHRHRRYGVGMIYLKLRQEGRLVNYKRVERLYRQQQLQVRRRTRKKVPVGERAPLLRPT
KANQVWSMDVVFDRTAEGRAIKCLVIVDDATHEAVAIGVERAISGHGVARVLDRLAHSRGLPKMIRTDNGKEFCGKAMVA
WAHANRVQRRQIQPGKPNQNAYVESFNGRRRDECLNEHWFPTLLHARTEIERWRREYNEHRPKKAIGAMTPAAYAQQLAT
SDIINPGL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed ABR13540.1 insertion sequence IS407 OrfB Not tested PAGI-8 Protein 1e-48 53
XCV0439 YP_362170.1 ISRSO12 transposase (fragment) Not tested Hrp PAI Protein 6e-26 41