Gene Information

Name : XOC_1561a (XOC_1561a)
Accession : YP_005627907.1
Strain : Xanthomonas oryzae BLS256
Genome accession: NC_017267
Putative virulence/resistance : Unknown
Product : ISXac3 transposase, IS3 family
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1532469 - 1533407 bp
Length : 939 bp
Strand : +
Note : -

DNA sequence :
GTGGCGCCCGGTGACGGAGGAGCGCGACATCCTAAAAAAGGCCGCCGCGTACTTTGCCAAGGGGTAAAGGCAAAGTACGT
CTTCATGCAAGCCCACCGCGAAGAATTCAGGGTGTGCGCGATGTGCCGGGTGTTGCGGGTGAACCGGGCTGGATACGACG
CGTGGCTGAAGTCGCCCGACAGTGAGCGCGCCAAGGAAGACGAACGCCTGCTGGGGCTGATCAAGCACCACTGGCTGGCC
AGCGGCAGTGTGTATGGGCATCGCAAGATCGCCAAGGATCTGCGCGATCTGGGTGAGCGTTGCAGTCGCCATCGGGTGCA
TCGGCTGATGCGCGCCGATGGGCTGCGTGCCCAGGTGGGCTATGGTCGCAAACCGCGCTTCCATGGCGGAATGCCGTGCA
AGGCGGCAGCCAACCTGCTGGATCGGCAGTTCGACGTGACCGAGCCGGACACGGCCTGGGCGAGCGACTTCACCTTTATC
CGCACGCATGAAGGCTGGATGTACCTGGCTGTGGTGATTGATCTGTTTTCCAGGCAGGTCGTCGGCTGGGCGATGCGCGA
TCGAGCCGATACCGAGTTGGTCGTGCAGGCCTTGCTGTCGGCGGTGTGGCGGCGCAAGCCCAGCGCCGGTTGCCTGGTTC
ATTCGGACCAAGGGTCGGTCTACACCAGCGATGACTGGCGCAGTTTCCTGGTGTCCCACGGCTTGGTGTGCAGCATGAGT
CGACGTGGCAACTGCCATGACAATGCCCCGGTGGAGAGCTTCTTCGGTCTGCTCAAACGCGAGCGGATCAGGCGGCGGAT
CTACCCCACCAAGGACGCCGCACGCGCCGAGGTGTTCGACGACATCGAAATGTTCTACAACCCACAACGCCGTCATGGTT
CAACCGGCAACCTATCGCCTGTAGAGTTTGAACGGCGCTACGCGCAACGAGGGTCTTGA

Protein sequence :
MAPGDGGARHPKKGRRVLCQGVKAKYVFMQAHREEFRVCAMCRVLRVNRAGYDAWLKSPDSERAKEDERLLGLIKHHWLA
SGSVYGHRKIAKDLRDLGERCSRHRVHRLMRADGLRAQVGYGRKPRFHGGMPCKAAANLLDRQFDVTEPDTAWASDFTFI
RTHEGWMYLAVVIDLFSRQVVGWAMRDRADTELVVQALLSAVWRRKPSAGCLVHSDQGSVYTSDDWRSFLVSHGLVCSMS
RRGNCHDNAPVESFFGLLKRERIRRRIYPTKDAARAEVFDDIEMFYNPQRRHGSTGNLSPVEFERRYAQRGS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
trp1329B CAB46576.1 IS1329 transposase B Not tested HPI Protein 5e-38 44
tnpB CAB61574.1 transposase B Not tested HPI Protein 3e-38 44
unnamed AAL57519.1 transposase 1 Not tested LEE Protein 5e-41 41
ECO111_3779 YP_003236114.1 putative IS602 transposase OrfB Not tested LEE Protein 1e-29 41