Gene Information

Name : XOC_1444 (XOC_1444)
Accession : YP_005627793.1
Strain : Xanthomonas oryzae BLS256
Genome accession: NC_017267
Putative virulence/resistance : Virulence
Product : arabinose 5-phosphate isomerase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1430014 - 1431015 bp
Length : 1002 bp
Strand : -
Note : -

DNA sequence :
ATGGCTGTCTCGCACCTGCCTTCCGCCACCGTCAGCGACGCCAGTCTGGTTGCCAGCGGTCAGCGCGTGCTGGAGATCGA
GCGCGAGGCGCTGGCCAACGTGGGCGCGCGCATCGGCAGCGAGTTCGCCGCGGCCTGCCGGCTGGTGCTGGCCTCGCGCG
GGCGGGTGGTCGCCACCGGCATGGGCAAGTCCGGCCATGTGGCGCGCAAGATCGCCGCCACCCTCGCCTCCACCGGCACT
CCGGCGTTCTTCGTGCACCCCGGCGAAGCCGGCCATGGCGATCTGGGCATGATCACCGAGGCCGACATCGTGCTGGCGCT
GTCGTATTCGGGGGAATCGGACGAAGTGCGCATGCTGCTGCCGGTGCTCAAGCGCCAGGGCAACCCGATCATCGCCATGA
CCGGCCGCACCAGTTCCACCCTGGCCCAGGCCGCCGACGTGCACCTGGACGTCAGCGTCTCCGCCGAGGCCTGCCCGTTG
CATCTGGCACCCACCTCCAGCACCACCGCCTCGCTGGCGATGGGCGATGCGCTGGCAGTCGCCTTGCTCGATGCGCGCGG
CTTCACCGCCGACGACTTCGCGCGTTCGCATCCGGCCGGCAGCCTGGGCCGGCGCCTGCTGCTGCACATCACCGACGTGA
TGCATGCCGGCGACGACCTGCCGCGTGTGCGTGAAGACGCCAGCCTGAGCGAGGCGCTGATGGAAATGAGCCGCAAGCGG
CTGGGCATGACCGCCGTGGTGGACAACGACGAGCGCCTGATCGGGCTGTTCACCGACGGCGACCTGCGCCGCGCACTGGA
CAGCGACATCGACGTGCGCAGCGCCGGCATCGCACAGGTGATGACGCGCAACCCGCGCACCATCGGCGCCGACCAGCTGG
CCGCCGAGGCGGCGCGGCTGATGGAGGACTACAAGATCAACGGCCTGATCGTGGTCGATGCGCAGCAGCGCGCGGTGGGC
GCATTGAACATTCACGACCTGTTGCGCGCCAAGGTGGTTTAA

Protein sequence :
MAVSHLPSATVSDASLVASGQRVLEIEREALANVGARIGSEFAAACRLVLASRGRVVATGMGKSGHVARKIAATLASTGT
PAFFVHPGEAGHGDLGMITEADIVLALSYSGESDEVRMLLPVLKRQGNPIIAMTGRTSSTLAQAADVHLDVSVSAEACPL
HLAPTSSTTASLAMGDALAVALLDARGFTADDFARSHPAGSLGRRLLLHITDVMHAGDDLPRVREDASLSEALMEMSRKR
LGMTAVVDNDERLIGLFTDGDLRRALDSDIDVRSAGIAQVMTRNPRTIGADQLAAEAARLMEDYKINGLIVVDAQQRAVG
ALNIHDLLRAKVV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
kpsF CAE85210.1 KpsF protein Virulence PAI V 536 Protein 3e-60 44
kpsF AAZ04466.1 polysialic capsule transport protein Virulence PAI I APEC-O1 Protein 5e-60 44
kpsF YP_854329.1 polysialic acid capsule synthesis protein KpsF Not tested PAI I APEC-O1 Protein 6e-60 44