Gene Information

Name : XOC_1345 (XOC_1345)
Accession : YP_005627697.1
Strain : Xanthomonas oryzae BLS256
Genome accession: NC_017267
Putative virulence/resistance : Unknown
Product : IS1403 transposase, IS3 family
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1330419 - 1331261 bp
Length : 843 bp
Strand : -
Note : -

DNA sequence :
GTGGTGAGCGCACCGGCGCGTCGTGCGCTGGTGCGCGAGTGGATCGGGCGTGGCGCTAGCGAACGTCGTGCGTTGGCAGC
GATCGGCATGAGCGCCAGTGCGCTGCGCTATTGCCCGTGCGAAGACCGCAACGTCGAGCTGCGTGAGCGCATCGTTGCGT
TGGCGCATCGCCATCGCCGCTATGGCGTGGGGATGATCTATCTCAAACTGCGACAGGAAGGGCGCATCGTGAACTACAAG
CGGGTGGAGCGGCTGTACCGCGAGCAGCAGCTGCAGGTCAGGCGCTGCAAGCGCAAGAAGGTCCCGATGGGCGAGCGCCA
GCCGCTGTTGCGGCCAGCGCAGGCCAACCAGGTGTGGTCAATGGACTTCGTATTCGACCGCACTGCCGAAGGCCGAGTCA
TCAAGTGTCTGGTGATCGTGGACGACGCAACACACGAAGCGGTCGCCATCGACGTGGAGCGCGCGATCTCGGGCCACGGC
GTGACACGCGTGTTGGACCGGCTGGCGCACAGTCGCGGCCTGCCGCAAGTGATCCGCACCGATAACGGCAAGGAGTTTTG
CGGCAAGGCCATGGTCGCCTGGGCGCATGCCCGTGGCGTGCAGTTACGGCTGATCCAACCCGGCAAGCCGAACCAGAATG
CCTACGTCGAATCGTTCAACGGCCGACTACGCGACGAATGCCTCAACGAACACTGGTTCCCGACGCTACTGCATGCGCGC
ACCGAGATCGAGCGCTGGCGGCGCGAATACAACCAAGACCGACCCAAGAAAGCAATCGGCGGCATGACACCGGCTGCTTA
TGCCCAACATCTAGCAAACACCGATATCATTAGTCGCCCCTGA

Protein sequence :
MVSAPARRALVREWIGRGASERRALAAIGMSASALRYCPCEDRNVELRERIVALAHRHRRYGVGMIYLKLRQEGRIVNYK
RVERLYREQQLQVRRCKRKKVPMGERQPLLRPAQANQVWSMDFVFDRTAEGRVIKCLVIVDDATHEAVAIDVERAISGHG
VTRVLDRLAHSRGLPQVIRTDNGKEFCGKAMVAWAHARGVQLRLIQPGKPNQNAYVESFNGRLRDECLNEHWFPTLLHAR
TEIERWRREYNQDRPKKAIGGMTPAAYAQHLANTDIISRP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed ABR13352.1 insertion sequence IS407 OrfB Not tested PAGI-5 Protein 2e-51 55
unnamed ABR13540.1 insertion sequence IS407 OrfB Not tested PAGI-8 Protein 1e-59 53
XCV0439 YP_362170.1 ISRSO12 transposase (fragment) Not tested Hrp PAI Protein 2e-39 42