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Name : lysS (YPC_0920) Accession : YP_005622894.1 Strain : Yersinia pestis Harbin 35 Genome accession: NC_017265 Putative virulence/resistance : Virulence Product : lysyl-tRNA synthetase Function : - COG functional category : - COG ID : - EC number : 6.1.1.6 Position : 934075 - 935592 bp Length : 1518 bp Strand : + Note : - DNA sequence : ATGTCAGAGCAAAAACCACAAGTCGCTGAGCAAGCGCAAGAACTCAATAGTGAGTTACAAGCCCGTCGAGAAAAACTGGC TGTCTTACGGGGAAAGGGAATTGCATTCCCTAATGATTTCCGCCGTGAGAACCTTTCCGACCAGTTGCATGCCGAGTTTG ACAGTAAAGAGAATGAAGAGTTAGAAGCACTGAATATCGACGTAACCGTTGCTGGCCGTATGATGACCCGCCGTATCATG GGTAAAGCATCATTTGTGACTCTGCAAGATGTTGGTGGCCGTATCCAGTTGTACGTTTCCCGTGATGACCTACCGGAAGG CGTTTATAACGAAGAATTCAAAAAGTGGGACCTGGGCGATATCCTGGGTGCGCGCGGTAAACTGTTTAAAACCAAAACCG GTGAGCTGTCGATCCACTGTAGCGAACTGCGTCTGTTGACCAAGGCTCTGCGTCCATTGCCAGATAAATTCCATGGCTTA GCTGACCAGGAAACCCGTTACCGCCAGCGTTATTTGGATCTGATTGCTAACGACGAGTCTCGTCATACTTTCAAAGTCCG TTCGCAAGTGATGTCCGGTATCCGTAGCTTCATGGTTGAAAAAGGCTTCATGGAAGTCGAAACGCCAATGATGCAAGTGA TCCCTGGCGGCGCTTCCGCACGTCCGTTTGTCACGCATCACAATGCGTTGGATATCGATATGTATTTGCGTATCGCGCCA GAGCTGTATCTGAAACGTCTGGTCGTGGGGGGCTTCGAACGTGTGTTCGAAATCAACCGTAACTTCCGCAACGAAGGGGT TTCGCCACGTCATAACCCAGAGTTCACCATGATGGAACTCTATATGGCTTATGCGGACTATAAAGACCTGATCGTCTTGA CGGAAGAGCTATTCCGCACTCTGACCGAAACCATATTGGGGAGCAGTGTGGTGCAATATGGCGAACAGACTTTTGATTTC GGTAAGCCTTTTGCCAAATTGACCATGAAAGAAGCTATTTGTAAATATCGTCCTGAAACCAATGTCGCGGATTTAGACGA TATGGATAAAGCCGTCGCAATTGCCGAATCATTGGGTATCAAGGTTGAGAAGAGCTGGGGCCTGGGTCGTATTCAATGTG AAATCTTTGAAGAGACCGCAGAAAGTCATCTTATCCAGCCAACGTTCATCACAGAATATCCAGCCGAGGTTTCTCCGCTA GCACGCCGTAATGACGATAATCCATTTATCACTGACCGCTTTGAATTCTTCATCGGTGGCCGTGAAATTGGTAATGGCTT CTCTGAGTTGAACGATGCCGAAGACCAGGCGCAGCGTTTCGCCGATCAGGTAAGTGCTAAAGAAGCTGGCGATGATGAAG CGATGTTCTACGATGAAGACTATATCACTGCATTGGAACATGGCTTACCACCAACCGCAGGGCTAGGTATTGGTATTGAC CGTATGGTTATGTTGTTTACCAATAGCCATACCATCCGTGATGTCATTTTATTCCCAGCGATGCGCCCGGTAAAATAA Protein sequence : MSEQKPQVAEQAQELNSELQARREKLAVLRGKGIAFPNDFRRENLSDQLHAEFDSKENEELEALNIDVTVAGRMMTRRIM GKASFVTLQDVGGRIQLYVSRDDLPEGVYNEEFKKWDLGDILGARGKLFKTKTGELSIHCSELRLLTKALRPLPDKFHGL ADQETRYRQRYLDLIANDESRHTFKVRSQVMSGIRSFMVEKGFMEVETPMMQVIPGGASARPFVTHHNALDIDMYLRIAP ELYLKRLVVGGFERVFEINRNFRNEGVSPRHNPEFTMMELYMAYADYKDLIVLTEELFRTLTETILGSSVVQYGEQTFDF GKPFAKLTMKEAICKYRPETNVADLDDMDKAVAIAESLGIKVEKSWGLGRIQCEIFEETAESHLIQPTFITEYPAEVSPL ARRNDDNPFITDRFEFFIGGREIGNGFSELNDAEDQAQRFADQVSAKEAGDDEAMFYDEDYITALEHGLPPTAGLGIGID RMVMLFTNSHTIRDVILFPAMRPVK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | CAD66193.1 | putative lysil-tRNA synthetase LysU | Not tested | PAI III 536 | Protein | 1e-164 | 67 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| lysS | YP_005622894.1 | lysyl-tRNA synthetase | VFG1668 | Protein | 6e-165 | 67 |
