Gene Information

Name : xerD (YPC_0916)
Accession : YP_005622890.1
Strain : Yersinia pestis Harbin 35
Genome accession: NC_017265
Putative virulence/resistance : Unknown
Product : site-specific tyrosine recombinase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 929402 - 930301 bp
Length : 900 bp
Strand : +
Note : -

DNA sequence :
ATGAAACAGCAAGATAACCCGCTGATTGAACAATTTCTTGATGCTCTGTGGCTGGAACGAAATCTGGCAGAGAATACACT
GGCGTCATACCGTTTGGATTTACATGCGCTGGTTGGATGGTTGACACACCATAACAGTGATTTATTGCGCGCCAGCCCGC
AGGACTTGCAATCCTTCCTTGCTGAACGGATCGAGGGTGGCTATAAAGCCACCAGCTCGGCTCGTTTACTCAGTGCGATG
CGCCGGTTATTTCAATATTTATACCGGGAGAAACTGCGTGAGGATGATCCGACTGCGCTGCTCTCTTCACCCAAATTACC
GCAGCGCTTGCCGAAGGATTTAAGTGAGGCACAGGTCGATGCGTTACTTAACTCGCCCAATGTGGACATTCCCTTGGAAC
TGCGCGATAAAGCAATGCTGGAAGTGCTCTATGCCACCGGCTTGCGGGTGTCAGAATTGGTCGGGCTGACCATCAGTGAT
GTTAGTCTACGCCAAGGTGTGGTGAGAGTGATTGGTAAAGGGAATAAAGAGCGCTTGGTCCCCTTGGGGGAAGAAGCTGT
GTATTGGATTGAGAACTATATGGAGCATGGCCGGCCTTGGTTGGTTAATGGCGCATCGCTGGATGTATTGTTCCCCAGTA
ACCGTAGCCAGCAAATGACCCGTCAGACTTTCTGGCATCGCATCAAACACTATGCGATCCTTGCCGGTATTGATAGTGAA
AGGCTTTCACCCCATGTGCTACGCCATGCCTTTGCCACGCATCTGCTGAATCACGGTGCCGATTTACGTGTAGTGCAAAT
GTTACTGGGCCACAGTGATCTGTCGACAACTCAGATTTATACGCATGTAGCGACTGAACGTTTGAGACAGCTACATCAAC
AGCATCATCCACGCGCTTAA

Protein sequence :
MKQQDNPLIEQFLDALWLERNLAENTLASYRLDLHALVGWLTHHNSDLLRASPQDLQSFLAERIEGGYKATSSARLLSAM
RRLFQYLYREKLREDDPTALLSSPKLPQRLPKDLSEAQVDALLNSPNVDIPLELRDKAMLEVLYATGLRVSELVGLTISD
VSLRQGVVRVIGKGNKERLVPLGEEAVYWIENYMEHGRPWLVNGASLDVLFPSNRSQQMTRQTFWHRIKHYAILAGIDSE
RLSPHVLRHAFATHLLNHGADLRVVQMLLGHSDLSTTQIYTHVATERLRQLHQQHHPRA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB0868_00311 YP_008211637.1 Site-specific recombinase XerD Not tested AbaR26 Protein 3e-62 56
BJAB07104_00307 YP_008207772.1 Site-specific recombinase XerD Not tested AbaR25 Protein 3e-62 56