Gene Information

Name : YPC_0533 (YPC_0533)
Accession : YP_005622533.1
Strain : Yersinia pestis Harbin 35
Genome accession: NC_017265
Putative virulence/resistance : Unknown
Product : putative transposase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 504698 - 505453 bp
Length : 756 bp
Strand : +
Note : -

DNA sequence :
ATGATGCAGAGCCGCACTGTATACAACTATCGTAGCCATCGTGACGATCGGGCTATTACTCAGCGAATACGGGAAATTGC
GGAGACGCGCATCCGTTATGGCTGTCCGCGCATTCATATCCTGCTGCGGAGAGAAGGCTGGCTTGTTAACCATAAGAAAA
CGCACCGTATTTACTGTCTTGAGGGTCTCAATCTACGTTCGAAACGTCCACGGTGGCATGTGACAGCGAGGCACAGGCAC
GCAAGTCCAGAAGTGACCGCGTTAGATCAGTGCTGGAGCATGGATTTCGTTGCTGATAATCTGTTCAACGGGCGTCGGGT
CAGGGCGCTAACTATAGTGGATAATTTTAGTCGTGAATGTCTGGCGATCGAGGTCGGTCAGGGGTTACGTGGAGATGATG
TTGTGGCTGTCATGGACAGATTAAAACATTCGCTGGGGCGTATTCCACAAAGGCTGCAGACAGATAACGGCAGCGAATTC
ATCTCGAAGTCGATGGACCGATGGGCGTATGAAAACAGGGTCTCGATGGACTTTTCAGGCCCCGGAAAGCCTACAGATAA
TGCCTTTATCGAGTCATTTAATGGCAGTCTGAGGGATGAATGTCTGAACGTGCACGGGTTCCTTTCTCTGGAAGATGCTC
AGGAGAAAATTGAACAATGGCGGCAAGAATATAATCATTTTCGTCCGTATTCTTCGTTAAATAACCTGACTCCGGCAGAA
TTTGCCCGAAGTCATCAAAAAGGTCCGGATCTCTGA

Protein sequence :
MMQSRTVYNYRSHRDDRAITQRIREIAETRIRYGCPRIHILLRREGWLVNHKKTHRIYCLEGLNLRSKRPRWHVTARHRH
ASPEVTALDQCWSMDFVADNLFNGRRVRALTIVDNFSRECLAIEVGQGLRGDDVVAVMDRLKHSLGRIPQRLQTDNGSEF
ISKSMDRWAYENRVSMDFSGPGKPTDNAFIESFNGSLRDECLNVHGFLSLEDAQEKIEQWRQEYNHFRPYSSLNNLTPAE
FARSHQKGPDL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
XCV0439 YP_362170.1 ISRSO12 transposase (fragment) Not tested Hrp PAI Protein 2e-49 54
unnamed ABR13352.1 insertion sequence IS407 OrfB Not tested PAGI-5 Protein 4e-37 47
unnamed ABR13540.1 insertion sequence IS407 OrfB Not tested PAGI-8 Protein 4e-44 46
trp1400B CAB46580.1 IS1400 transposase B Not tested HPI Protein 5e-41 44