Gene Information

Name : YPC_3658 (YPC_3658)
Accession : YP_005625392.1
Strain : Yersinia pestis Harbin 35
Genome accession: NC_017265
Putative virulence/resistance : Virulence
Product : putative outer membrane receptor
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3516756 - 3518951 bp
Length : 2196 bp
Strand : -
Note : -

DNA sequence :
ATGATAATTGATATCATTTGCTTTTACATTTATGCGTATATAATTACAATAGCCTTGAGGTATAAAAAAACGAACATAAA
TTTGCTAGAGGCGTATAAAATGTCAAATAAAACAATAGCGTTCGCGTTAGTAGTGGCATCATCAGCCCCTGTTATCGCAG
CAGATAATGACAATATTATGGTTGTTACCGCATCGGGATATGAACAGAAGATCAGAGAGGCTGCGGCAAGCATCTCGGTC
ATTAGCCAAAATGAATTACGTCAGCGCAATTACAACGATTTGGCGCAAGCGCTGAGTGATGTTGAAGGTGTTGACGTCAA
TAGCAGCACGGGGAAAACCGGGGGGCTGGATATCAGTATTCGTGGTATGCCCAGCGCTTATACCCTGATATTGGTGGATG
GGATCCGGCAAAATGGCACTTCCGATGTAACGCCAAATGGCTTTGGTGCCATGAATACCAGCTTTATGCCCCCGCTATCG
GCCATTGAGCGCATCGAAGTGATCAGGGGACCGATGTCAACGCTCTACGGTTCTGATGCTATCGGTGGTGTTGTTAATAT
CATCACAAAAAAGATCACCAAAGCGTGGGCCAGCTCAGCAACGCTTGAACACACCTTCCAGGAAAATACGGCTTTTGGTG
ACAGTTCAAAGTTCTCTTTTTACTCCAGTGGGCCAGCGGTTGAAGATCAACTGGGGCTGTCGTTACGTGGCACGATTTTC
CGGCGCGATGCCTCTCGCGTTGAATCCTCCAATACGGGAGTAGAATTAAGCCGTCGTGGTCCCAATCCAGTAAAAGCAGA
CAACTATAATCTCGGTGGCAAACTATTTTGGCAATTGAATACCCAAAGCACCTTGTGGTTGGATGGTGATATTGCTAACC
AAAAATATGATAACAGTGCCAACCAACTAGGTACCATTGGTGCACGAGGCGGTTACGAAGATACTCTGCGTTATCAACGC
CGTAAAATAACCTTGGGCAACGATAATCGTTTGGACTTTGGTACCTGGAATTCGAGCTTATCTTATAACCAAACTGAAAA
TATTGGCCGCTTAATCACCAATGCATCCGTGCCCCAAGGCTCTGGGTTGGCAGGTGAAAAACGTCTGTTGAAAAATACCA
ATATCATCCTTGATAGCAAGCTGGTCGCCCCGCTGGGTGATAACCACATGGTGACCCTTGGCGGTCAATATTGGAATGCC
ATCATGAAAGACGGCATCGTACTGGCAAATAATGGCGATGAGTTTGCACAAGATGCCTGGTCATTATTCAGCGAAGATGA
ATGGCGTCTGCTGGACTCACTGGCATTAACCTATGGCGCACGTTATGAATATCAAACTACGTTTGGCGGCCATATTAGCC
CACGAGCCTATCTGGTGTGGGACGCACAGGATAACTGGACGGTGAAAGGGGGTGTCAGCACGGGGTATAAAACCCCCACT
CTAGCCCAGTTGCATAATGGGATTAGCGGTGTCACAGGCCAAGGCACCATCACGACGATTGGTAACCCTAAGCTTGAACC
AGAGAGTAGTGTCAACACCGAGGTCGGTGTCTATTATGAAAACGAAACGGGATTTGGCGCTAATGTGACGCTGTTCCACA
ACCGCTTCAGGAACAAAATCAACAGCGTTTCGATTGATAATACCACCAGCACCTACACCAACGTCGGTAAAGCGATCACG
CAGGGTATTGAGGTCGCATCCACCATACCACTCTGGTCTGACGATTGGATGCTGGGAATAAATTACACCTTTACCGATAG
TGAACAGAAAGATGGCAACAATAAAGGGGCTCGCCTGACGAATACACCGAAAAATATGGTTAATGCCCGCCTGAACTGGA
ATATCAACGAGCAGTTGTCCACTTGGTTGAAAGCGGAGTATCGCAGTAAAACGGCACGTTTTACCCAAAATTACGCGAAT
TTGTCTGCGGCAAACAAAGTGGTTTACAACAATTTAGGCTCAGAGTTTAAACCTTTTAGCGTACTTAATTTGGGGGTGGC
CTATAAGGTCACTAAGGATGTGACACTGAATGGTGCAGTCAATAACCTGTTGGATAAAGATTTTACTCGCACCCACATTT
TTGCTGTGGGGAACGGCACCACTACTGCGGGTGATTACTTCACCTCGTCTCAAAGCACTGCCGGTTATGTTGTACCTGGC
CGTAATTACTGGGTATCCGTGAATGTTAATTTCTAG

Protein sequence :
MIIDIICFYIYAYIITIALRYKKTNINLLEAYKMSNKTIAFALVVASSAPVIAADNDNIMVVTASGYEQKIREAAASISV
ISQNELRQRNYNDLAQALSDVEGVDVNSSTGKTGGLDISIRGMPSAYTLILVDGIRQNGTSDVTPNGFGAMNTSFMPPLS
AIERIEVIRGPMSTLYGSDAIGGVVNIITKKITKAWASSATLEHTFQENTAFGDSSKFSFYSSGPAVEDQLGLSLRGTIF
RRDASRVESSNTGVELSRRGPNPVKADNYNLGGKLFWQLNTQSTLWLDGDIANQKYDNSANQLGTIGARGGYEDTLRYQR
RKITLGNDNRLDFGTWNSSLSYNQTENIGRLITNASVPQGSGLAGEKRLLKNTNIILDSKLVAPLGDNHMVTLGGQYWNA
IMKDGIVLANNGDEFAQDAWSLFSEDEWRLLDSLALTYGARYEYQTTFGGHISPRAYLVWDAQDNWTVKGGVSTGYKTPT
LAQLHNGISGVTGQGTITTIGNPKLEPESSVNTEVGVYYENETGFGANVTLFHNRFRNKINSVSIDNTTSTYTNVGKAIT
QGIEVASTIPLWSDDWMLGINYTFTDSEQKDGNNKGARLTNTPKNMVNARLNWNINEQLSTWLKAEYRSKTARFTQNYAN
LSAANKVVYNNLGSEFKPFSVLNLGVAYKVTKDVTLNGAVNNLLDKDFTRTHIFAVGNGTTTAGDYFTSSQSTAGYVVPG
RNYWVSVNVNF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
r4 AAC61730.1 exogenous ferric siderophore receptor R4 Not tested PAI I CFT073 Protein 1e-175 57
c3610 NP_755485.1 bifunctional enterobactin receptor/adhesin protein Not tested PAI I CFT073 Protein 1e-176 56
ECUMN_3356 YP_002414032.1 bifunctional enterobactin receptor/adhesin protein Virulence Not named Protein 1e-176 56
iha AAF36432.2 adhesin Virulence TAI Protein 1e-176 56
Z1178 NP_286713.1 bifunctional enterobactin receptor/adhesin protein Virulence TAI Protein 1e-176 56
Z1617 NP_287121.1 bifunctional enterobactin receptor/adhesin protein Not tested TAI Protein 1e-176 56
unnamed CAC39288.1 hypothetical protein Not tested LPA Protein 5e-176 55

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
YPC_3658 YP_005625392.1 putative outer membrane receptor VFG1731 Protein 5e-177 56