Gene Information

Name : YPC_3236 (YPC_3236)
Accession : YP_005625023.1
Strain : Yersinia pestis Harbin 35
Genome accession: NC_017265
Putative virulence/resistance : Unknown
Product : transposase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3116865 - 3117374 bp
Length : 510 bp
Strand : -
Note : -

DNA sequence :
TTGCGGTCTGGCAACTGCAAATGTTCAACAAGAAATCAAAAGGGGGTCCCAATGAGGGATGAAAAGAGCTTAGCGCACAC
CCGATGGAACTGTAAATATCATATAGTTTTTGCGCCGAAGTACCGAAGGCAGGTGTTCTACAGGGAAAAACGCAGAGCGA
TTGGCGGTATTTTAAGAAAACTGTGCGAATGGAAAAACGTGAATATCCTGGAAGCAGAATGCTGTGTGGATCACATCCAT
ATGCTTCTGGAGATCCCGCCCAAGATGAGTGTCTCGGGATTTATGGGGTACCTGAAGGGAAAGAGCAGTCTGATGCTTTA
TGAGCAGTTTGGCGATTTGAAGTTCAAATACCGTAACAGGGAGTTTTGGTGTCGAGGGTATTACGTTGATACGGTAGGGA
AAAACACGGCCAGGATACAAGAATACATAAAGCACCAATTGGAAGAGGATAAAATGGGTGAGCAACTCTCGATCCCGTAT
CCCGGTAGCCCGTTTACGGGCCGTAAGTAA

Protein sequence :
MRSGNCKCSTRNQKGVPMRDEKSLAHTRWNCKYHIVFAPKYRRQVFYREKRRAIGGILRKLCEWKNVNILEAECCVDHIH
MLLEIPPKMSVSGFMGYLKGKSSLMLYEQFGDLKFKYRNREFWCRGYYVDTVGKNTARIQEYIKHQLEEDKMGEQLSIPY
PGSPFTGRK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tnpA NP_455584.1 transposase for insertion sequence element is200 Not tested SPI-5 Protein 2e-66 93
CPR_0382 YP_697711.1 IS1469, transposase Not tested Not named Protein 6e-43 65
SP_1064 NP_345538.1 IS200 family transposase Not tested PPI-1 Protein 5e-46 63
EF0615 NP_814372.1 IS200 family transposase Not tested Not named Protein 7e-32 55
ef0123 AAM75324.1 EF0123 Not tested Not named Protein 5e-32 55