Gene Information

Name : kdsB (YPC_2769)
Accession : YP_005624597.1
Strain : Yersinia pestis Harbin 35
Genome accession: NC_017265
Putative virulence/resistance : Virulence
Product : 3-deoxy-manno-octulosonate cytidylyltransferase
Function : -
COG functional category : -
COG ID : -
EC number : 2.7.7.38
Position : 2684413 - 2685165 bp
Length : 753 bp
Strand : -
Note : -

DNA sequence :
ATGAGTTTCATTGCTATAATTCCCGCCCGCTATGCTTCAACCCGTTTACCCGGCAAACCACTGGCTGATATTGCGGGCAA
ACCGATGGTCGTCCATGTTATGGAGCGGGCCTTGGCGTCAGGTGCTGACCGGGTGATTGTGGCAACAGACCATCCAGATG
TGGTCAAGGCGGTTGAGGCCGCAGGTGGTGAAGTGTGCCTGACCCGTGCTGATCATCAGTCTGGCACTGAACGGTTAGCC
GAAGTTATTGAACACTATGGTTTTGCTGATGACGATATTATCGTCAATGTTCAGGGCGATGAACCCCTGGTGCCGCCGGT
GATTATCCGTCAGGTTGCTGATAATTTGGCTGCATGTAGTGCCGGCATGGCGACGTTGGCTGTTCCCATTGCAAGCAGTG
AAGAGGCGTTTAACCCTAATGCCGTTAAAGTGGTTATGGATGCTCAGGGTTATGCCCTCTACTTTTCCAGGGCCACCATT
CCGTGGGAAAGAGAGCGCTTTGCTCAATCAAAAGAGACTATCGGTGATTGTTTCTTACGTCACATCGGTATCTATGCCTA
TCGAGCAGGTTTTATCCGTCGCTATGTTAACTGGGCACCCAGTCAGCTTGAGCAAATTGAATTGTTAGAGCAACTGCGGG
TGTTATGGTACGGCGAGAAAATTCACGTTGCGGTGGCGAAAGCTGTGCCTGCGGTTGGGGTTGATACGCAGAGCGATTTA
GACCGAGTCCGGGCTATCATGCTCAATCAATAA

Protein sequence :
MSFIAIIPARYASTRLPGKPLADIAGKPMVVHVMERALASGADRVIVATDHPDVVKAVEAAGGEVCLTRADHQSGTERLA
EVIEHYGFADDDIIVNVQGDEPLVPPVIIRQVADNLAACSAGMATLAVPIASSEEAFNPNAVKVVMDAQGYALYFSRATI
PWERERFAQSKETIGDCFLRHIGIYAYRAGFIRRYVNWAPSQLEQIELLEQLRVLWYGEKIHVAVAKAVPAVGVDTQSDL
DRVRAIMLNQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
kpsU YP_854332.1 3-deoxy-manno-octulosonate cytidylyltransferase Not tested PAI I APEC-O1 Protein 5e-28 44
kpsU AAZ04469.1 CMP-KDO synthetase Virulence PAI I APEC-O1 Protein 4e-28 44
kpsU CAE85213.1 KpsU protein Virulence PAI V 536 Protein 1e-28 44