|
Name : YPC_2028 (YPC_2028) Accession : YP_005623907.1 Strain : Yersinia pestis Harbin 35 Genome accession: NC_017265 Putative virulence/resistance : Unknown Product : transposase Function : - COG functional category : - COG ID : - EC number : - Position : 1993307 - 1993789 bp Length : 483 bp Strand : + Note : - DNA sequence : TTGCGGTCTGGCAACTGCAAATGTTCAACAAGAAATCAAAAGGGGGTCCCAATGAGGGATGAAAAGAGCTTAGCGCACAC CCGATGGAACTGTAAATATCATATAGTTTTTGCGCCGAAGTACCGAAGGCAGGTGTTCTACAGGGAAAAACGCAGAGCGA TTGGCAGTATTTTAAGAAAACTGTGCGAATGGAAAAACGTGAATATCCTGGAAGCAGAATACTGTGTGGATCACATCCAT ATGCTTCTGGAGATCCCGCCCAAGATGAGTGTCTCGGGATTTATGGGGTACCTGAAGGGAAAGAGCAGTCTGATGCTTTA TGAGCAGTTTGGCGATTTGAAGTTCAAATACCGTAACAGGGAGTTTTGGTGTCGAGGGTATTACGTTGATACGGTAGGGA AAAACACGGCCAGGATACAAGAATGTAACGAACGGTGCAATAGTGATCCACACCCAACGCCTGAAATCAGATCCAGGGGG TAG Protein sequence : MRSGNCKCSTRNQKGVPMRDEKSLAHTRWNCKYHIVFAPKYRRQVFYREKRRAIGSILRKLCEWKNVNILEAEYCVDHIH MLLEIPPKMSVSGFMGYLKGKSSLMLYEQFGDLKFKYRNREFWCRGYYVDTVGKNTARIQECNERCNSDPHPTPEIRSRG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| tnpA | NP_455584.1 | transposase for insertion sequence element is200 | Not tested | SPI-5 | Protein | 1e-52 | 92 |
| CPR_0382 | YP_697711.1 | IS1469, transposase | Not tested | Not named | Protein | 3e-38 | 68 |
| SP_1064 | NP_345538.1 | IS200 family transposase | Not tested | PPI-1 | Protein | 4e-39 | 59 |
| ef0123 | AAM75324.1 | EF0123 | Not tested | Not named | Protein | 4e-29 | 52 |
| EF0615 | NP_814372.1 | IS200 family transposase | Not tested | Not named | Protein | 5e-29 | 52 |
