Gene Information

Name : YPC_2006 (YPC_2006)
Accession : YP_005623888.1
Strain : Yersinia pestis Harbin 35
Genome accession: NC_017265
Putative virulence/resistance : Resistance
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1972063 - 1973592 bp
Length : 1530 bp
Strand : +
Note : -

DNA sequence :
TTGATCCGATTCGACAATAGCGACAGCTATTTTTTTGCAGCAACCATTCCAGTCGTGATTTTCTGTGCACTGAATATTAT
TTTTAGCTTATTAACTCTCCCTCTGTTACGTAAGCCTATTATTATTTTATTCCTGTTGGGAAGTGCGGTGGCTAACTACT
TTATGTTCAGCTATGGTGCTGTTATCGATGCCAATATGATGCAGAATGCCTTTGAAACTAACTCACAGGAAGCCACCGCC
CTTTTCACTCCTCGTATGGCATTGTGGCTAATAACATTAGGTATTTTGCCTGCCATGATTGTCTGCTTTGTGCGAATTCG
AGCGACTCGCCCTTGGTGGTATATGCTGGGGTTACGGGTAGCAAATATTTTAATGTCAATGGTAATAATTTTTCTTATCG
CAGTCTTGTTCTATAAAGATTATGCGTCGCTGATCCGCAATAATAAAAATATCGTCAAAATGCTGACACCATCAAATTTT
GTTAGCGGCAGTTTTCAATTTGCCAAACACAAGTATTTTATCAGTAACATGCCATTGGTAAAAATAGGTGAAGACGCCCA
TAAGGGCCCAGTGATTAATGCACAACAAAATAAAACGCTGGTGATTTTGGTGGTGGGTGAAACCGCCCGGTCAGAAAACT
TTTCATTGGGCGGATATGCTCGGGAAACGAACCCTCGCCTGCAACAACAAGATATCATTTATTTCAAACATGCCTCATCC
TGTGGCACTGAAACGGCGGTCTCTGTCCCCTGTATGTTCTCTAATATGCCACGCAAAAGTTATGACGCCTCCCTGGCGAG
TCATCAGGAAGGGTTAATGGATATTATTGCGCGCGCTGGATTGAGTGTATTGTGGCGTGAAAATGATGGTGGCTGTAAAG
GCGCTTGTGACCGTATTCCACACCAGGATGTGACGCAATTGCAACTTAACGCAGATTGTCAGGATGGGGTATGTTTAGAT
AATGCGCTTTTATATAAACTGGATAACTATATTAATGGATTACAGAATGACGGTGTAATCGTCTTACACCAAATGGGCAG
CCACGGGCCCGCATACTATCGCCGTACCAGCCCGGAGTTGACTAAATTCACCCCGACGTGTAATAGCAACCAGATTCAGG
ACTGCACCGCCCAAGAACTGGTCAATACATACGATAACTCTATTCTCTATACTGATGCCATGCTGGATGACACCATTGCC
TTGTTGAAACAGCACAGTGACCGATTTAATACGGCGTTGGTCTATCTTTCAGACCATGGTGAATCACTCGGTGAAAACGG
CCTCTATTTACATGGTACACCTTATGTATTTGCCCCAAGCCAGCAAACTCATATCCCTTTTCTGATGTGGTTATCACCAG
AATATACAAAAAGCTATGGTATTGACCGTCAATGCTTATCACATAGCGCACAACAGGATGAAGTGTCTCAGGATAATCTC
TTCCATACCCTATTAGGGATGGTAAACATTCAGACCAACGAATACTTATCAGGCATGGATTTACTGCAAAAATGCCGGAG
TCTGCAATAG

Protein sequence :
MIRFDNSDSYFFAATIPVVIFCALNIIFSLLTLPLLRKPIIILFLLGSAVANYFMFSYGAVIDANMMQNAFETNSQEATA
LFTPRMALWLITLGILPAMIVCFVRIRATRPWWYMLGLRVANILMSMVIIFLIAVLFYKDYASLIRNNKNIVKMLTPSNF
VSGSFQFAKHKYFISNMPLVKIGEDAHKGPVINAQQNKTLVILVVGETARSENFSLGGYARETNPRLQQQDIIYFKHASS
CGTETAVSVPCMFSNMPRKSYDASLASHQEGLMDIIARAGLSVLWRENDGGCKGACDRIPHQDVTQLQLNADCQDGVCLD
NALLYKLDNYINGLQNDGVIVLHQMGSHGPAYYRRTSPELTKFTPTCNSNQIQDCTAQELVNTYDNSILYTDAMLDDTIA
LLKQHSDRFNTALVYLSDHGESLGENGLYLHGTPYVFAPSQQTHIPFLMWLSPEYTKSYGIDRQCLSHSAQQDEVSQDNL
FHTLLGMVNIQTNEYLSGMDLLQKCRSLQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Z1140 NP_286675.1 hypothetical protein Not tested TAI Protein 6e-100 43
Z1579 NP_287083.1 hypothetical protein Not tested TAI Protein 6e-100 43

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
YPC_2006 YP_005623888.1 hypothetical protein BAC0485 Protein 1e-140 55