Gene Information

Name : tpx (YPC_1972)
Accession : YP_005623858.1
Strain : Yersinia pestis Harbin 35
Genome accession: NC_017265
Putative virulence/resistance : Virulence
Product : lipid hydroperoxide peroxidase
Function : -
COG functional category : -
COG ID : -
EC number : 1.11.1.-
Position : 1942810 - 1943313 bp
Length : 504 bp
Strand : +
Note : -

DNA sequence :
ATGACACAGACCGTACATTTCCAAGGCAATCCAGTTTCTGTCGCAGGTAAACTGCCACAAATTGGTGATAAAGCGAAAGA
CTTCACTTTGGTAGCAAAAGATTTATCTGACGTTGCCCTGAGCAGTTTTGCTGGTAAACGCAAAGTCCTGAATATCTTCC
CAAGTATTGATACCGGCGTTTGCGCCGCCTCGGTACGTAAGTTCAATCAACTGGCTGGCGAACTTGAGAACACCGTAGTG
CTTTGTATCTCCTCTGACCTGCCCTTTGCTCAATCACGTTTTTGCGGGGCTGAAGGTCTGAGCAACGTCATCACGCTGTC
AACTCTGCGCGGCGCTGATTTTAAACAAGCTTACGGTGTAGCAATTACTGAAGGCCCTCTGGCAGGTTTGACCGCACGCG
CGGTTGTCGTTCTGGATGGCCAGGACAACGTCATCTACAGCGAATTGGTTAACGAAATCACTACCGAACCAAACTACGAT
GCCGCGCTGGCTGCACTGAAATAA

Protein sequence :
MTQTVHFQGNPVSVAGKLPQIGDKAKDFTLVAKDLSDVALSSFAGKRKVLNIFPSIDTGVCAASVRKFNQLAGELENTVV
LCISSDLPFAQSRFCGAEGLSNVITLSTLRGADFKQAYGVAITEGPLAGLTARAVVVLDGQDNVIYSELVNEITTEPNYD
AALAALK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tpx NP_230472.1 thiol peroxidase Virulence VPI-1 Protein 5e-35 49
tagD AAK20751.1 toxR-activated gene D protein Virulence VPI Protein 6e-35 49
tagD AAK20781.1 toxR-activated gene D protein Virulence VPI Protein 3e-35 49
tpx YP_001216305.1 thiol peroxidase Not tested VPI-1 Protein 9e-35 49

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
tpx YP_005623858.1 lipid hydroperoxide peroxidase VFG0087 Protein 1e-35 49