Gene Information

Name : nifJ (YPC_1963)
Accession : YP_005623849.1
Strain : Yersinia pestis Harbin 35
Genome accession: NC_017265
Putative virulence/resistance : Virulence
Product : putative pyruvate-flavodoxin oxidoreductase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1930092 - 1933625 bp
Length : 3534 bp
Strand : +
Note : -

DNA sequence :
ATGATTACGACTGACGGCAACAGCGCAGTGGCTTCTGTGGCCTATCGTGCCAGCGAAGTTATTGCTATCTACCCCATTAC
CCCCAGTTCTACGATGGCAGAGCAAGCCGATGCTTGGTCAGGTGACGGCAAAGTGAACATCTGGGGCGATGTGCCGCGGG
TGGTCGAAATGCAGTCCGAAGGGGGGGCTATCGCCACGGTTCATGGGGCATTGCAAACTGGCGCATTATCCACCTCCTTT
ACCTCCTCGCAGGGATTGTTATTAATGATCCCAACACTGTACAAACTGGCTGGCGAATTAACACCATTTGTACTTCATGT
TGCAGCCCGGACAATTGCTACCCATGCATTATCCATCTTTGGTGACCATTCCGATGTGATGGCGGTACGCCAAACAGGCT
GCGCCATGTTATGCGCCAGTAGCGTACAGGAGGCTCAGGATTTTGCCCTGATTTCACAGATTGCCACCCTGAATAGCCGA
ATTCCCTTTATCCATTTCTTTGATGGTTTTCGCACCTCGCATGAAATCAACAAAATAGAGCCACTCAGTGACGAGACGTT
GCGCCAGTTATTGCCTCAAGCAGGGATTAATGCGCACCGGAGCCGGGCTCTTTCGCCAGATCACCCAGTGGTACGCGGCA
CCTCAGCCAATCCAGATACCTATTTCCAGTCACGGGAAGCCACTAACCCTTGGTATAACAACACCTATCAGCATGTTGCG
GATGCCATGCAGGCATTTGCTGAAGCCACTGGGCGTGAATATAAACCGTTTGAATATTACGGCCATCCACAAGCTGACCG
TGTCATTATTTTAATGGGTTCCGCTATCGGTACCTGCGAAGAGGTTATTGACACCTTGCTCACTCGAGGGGAGAAAGTCG
GTGTGCTAAAAGTACGCTTATTTCGCCCCTTCTCCGCACAGCATCTGCTTGCGCTCTTGCCCGCGTCGGTCGGCAAAATT
GCGGTTTTGGATCGCACCAAAGAGCCTGGCGCATTAGCTGAACCCCTGTATTTGGATGTAATGACGGCATTAGCTGAAGC
TTATAGCCGTGGTGATCGTGATACATTGCCAAAAGTCATTGGGGGACGCTATGGCTTATCCTCCAAAGAATTTGGCCCCC
ATTGCGTATTGGCCATTTTCAGAGAGCTGTCATTAGACTTACCACGCCCCCGGTTTACAGTTGGAATTTTTGATGATGTG
ACCGGCCTATCGTTGCCCCTAAGCGACGAAAAAATTGAATCGCGCGCAACATTGGAAGCCCTATTTTATGGCCTGGGAAG
TGATGGTTCAGTCTCTGCCACCAAGAATAACATCAAGATTATCGGCAACAGCACCGCACTCTACGCTCAAGGTTATTTTG
TTTACGATTCGAAGAAGGCTGGAGGCCTGACGGTCTCACATCTACGCGTAAGCCAGACGCCGATTAACTCAGCCTATCTG
GTTAGCCACGCCGATTTTGTCGGCTGCCACCAGCTACAGTTTATCGATATTTATCAAATGGCTGAACGCCTTAAACCCGG
AGGGATATTCTTACTCAATACCCCCTTCAGCGCGGATGAGATGTGGCCACGTTTGCCACAAGACGTTCAGGCAGTATTGC
ATCAGCGCCATGCCCGTTTGTTTGTGATCAATGCTGCGAAAATTGCCCGTGAATGCAAACTCGGTGCCCGCATCAATACC
GTCATGCAGATGGCCTTCTTCCATCTGACACAGATTCTGCCAACGGCCATGGCACAAGAGCAATTACGGGCCGCGATTGA
ACGCAGTTACAGCAATAAAGGGGCAGAAATTGTCACCCGCAACTGGCAAGCACTGGATGCAACTCTCGAAGCCTTAATTG
AGATCCCGCTGCAACCTATTGACGAAAACAGCCCTGTACGCCCACCGATTGTTTCAGACCAAGCGCCCGATTTCGTTAAA
ACCGTTACGGCAACCATGCTGGCAGGCTTGGGTGATACGCTGCCGGTATCGGCCTTCCCGCCCGATGGCACCTGGCCTGT
CGGTACCACCCAATGGGAAAAACGCAATATTGCAGAAAACATCCCCATCTGGCAGCCAGACCTTTGTACACAATGTAATC
ACTGTGTCGCTGCCTGCCCACACTCGGCTATCCGTGCCAAAGTGGTACAACCTGAGGCCATGGCCGGTGCGCCGGACAGC
TTACAGTCACTGGATGTTAAAGCCCGTGATATGCGTGGGCAGAAATATATCTTACAAGTGGCGCCCGAAGATTGTACTGG
CTGCAACCTGTGTTATGAAGTCTGCCCTGCCAAAGATCGCCAAAATCCAGAAATCAAAGCGATTAACATGCGGCCGCGTC
TGGAACACCGGGCGGTAGAAAAAGCACATTATGATTTCTTCCTCAAGCTGCCTGAAATCGATAAAACACAAATGGAACGT
ATCGATATCCGGACTTCACAATTGATTTCACCGCTGTTCGAATATTCCGGAGCCTGCTCCGGTTGTGGTGAAACACCGTA
TATCAAATTGTTGACCCAGTTGTATGGCGATCGTCTGCTCATTGCCAATGCCACCGGTTGCTCTTCGATCTATGGCGGTA
ACCTGCCTACCACGCCATACACCACCAATGCCGATGGCCGTGGGCCTGCATGGGCAAACTCATTGTTCGAAGATAATGCG
GAGTTTGGTTTAGGCTTTCGCCTAACCGTCGATCAGCATCAAAAACGTGTTACCCGGCTGATCCAACAGCTAGCACCTCA
ACTGCCGGATGAGTTGGTCAATCAACTGATCAATCAGGAATACACCCCAGAAGAGCGGCGTAAGCAAGTCTCACAATTGC
GTCAGTTGTTACGTGAGATACCAGGCAATGATGCACAACAGTTAGCAGCAGACGCCGACTATCTGGTGGATAAATCTATC
TGGCTGATTGGCGGTGATGGCTGGGCATATGATATTGGTTTTGGCGGTTTGGACCATGTCCTGAGCCTGACAGAAAATGT
CAATGTGCTGGTACTGGACACCCAGTGCTATTCCAATACCGGTGGTCAGCAATCCAAGGCGACTCCCCTCGGTGCGGTCA
CCAAATTTGGTGAACACGGTAAACGCAAAGCGCGCAAAGATTTGGGCGTCAGTATGATGATGTATGGCCACGTCTATGTG
GCACAGATCTCTATTGGGGCACAGCTCAATCAGACGGTGAAAGCCATTCAGGAAGCAGAAGCCTATCCCGGCCCGTCACT
GATTATTGCTTACAGCCCTTGTGAGGAACACGGTTACGATTTGGCATACAGCCATGACCAAATGAAGCAATTGACGGCCA
CCGGTTTCTGGCCATTGTATCGCTTTGACCCGCGCCGCGCCGATGAAGGCAAAACCGCGTTAGCACTGGATTCACGCCCA
CCAAGCAGTGACTTGACCACCACACTGCTTAATGAGCAACGTTTCCGCCGGTTAAATACGCAAGAACCCGCCGTTGCCGC
CCAGTTATATGCCGAGGCTGAAAAAGATCTGAAAAAACGCTATGACTTCTTGAGTTTACTCGCTGGCAAAACGGAAAAAA
CGCCTTCGGAATAA

Protein sequence :
MITTDGNSAVASVAYRASEVIAIYPITPSSTMAEQADAWSGDGKVNIWGDVPRVVEMQSEGGAIATVHGALQTGALSTSF
TSSQGLLLMIPTLYKLAGELTPFVLHVAARTIATHALSIFGDHSDVMAVRQTGCAMLCASSVQEAQDFALISQIATLNSR
IPFIHFFDGFRTSHEINKIEPLSDETLRQLLPQAGINAHRSRALSPDHPVVRGTSANPDTYFQSREATNPWYNNTYQHVA
DAMQAFAEATGREYKPFEYYGHPQADRVIILMGSAIGTCEEVIDTLLTRGEKVGVLKVRLFRPFSAQHLLALLPASVGKI
AVLDRTKEPGALAEPLYLDVMTALAEAYSRGDRDTLPKVIGGRYGLSSKEFGPHCVLAIFRELSLDLPRPRFTVGIFDDV
TGLSLPLSDEKIESRATLEALFYGLGSDGSVSATKNNIKIIGNSTALYAQGYFVYDSKKAGGLTVSHLRVSQTPINSAYL
VSHADFVGCHQLQFIDIYQMAERLKPGGIFLLNTPFSADEMWPRLPQDVQAVLHQRHARLFVINAAKIARECKLGARINT
VMQMAFFHLTQILPTAMAQEQLRAAIERSYSNKGAEIVTRNWQALDATLEALIEIPLQPIDENSPVRPPIVSDQAPDFVK
TVTATMLAGLGDTLPVSAFPPDGTWPVGTTQWEKRNIAENIPIWQPDLCTQCNHCVAACPHSAIRAKVVQPEAMAGAPDS
LQSLDVKARDMRGQKYILQVAPEDCTGCNLCYEVCPAKDRQNPEIKAINMRPRLEHRAVEKAHYDFFLKLPEIDKTQMER
IDIRTSQLISPLFEYSGACSGCGETPYIKLLTQLYGDRLLIANATGCSSIYGGNLPTTPYTTNADGRGPAWANSLFEDNA
EFGLGFRLTVDQHQKRVTRLIQQLAPQLPDELVNQLINQEYTPEERRKQVSQLRQLLREIPGNDAQQLAADADYLVDKSI
WLIGGDGWAYDIGFGGLDHVLSLTENVNVLVLDTQCYSNTGGQQSKATPLGAVTKFGEHGKRKARKDLGVSMMMYGHVYV
AQISIGAQLNQTVKAIQEAEAYPGPSLIIAYSPCEEHGYDLAYSHDQMKQLTATGFWPLYRFDPRRADEGKTALALDSRP
PSSDLTTTLLNEQRFRRLNTQEPAVAAQLYAEAEKDLKKRYDFLSLLAGKTEKTPSE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AFJ97267.1 pyruvate ferredoxin Virulence Not named Protein 0.0 46