Gene Information

Name : YPC_1899 (YPC_1899)
Accession : YP_005623792.1
Strain : Yersinia pestis Harbin 35
Genome accession: NC_017265
Putative virulence/resistance : Unknown
Product : LysR family transcriptional regulator YnfL
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1864634 - 1865512 bp
Length : 879 bp
Strand : +
Note : -

DNA sequence :
ATGAGTATTGAACTAAGACATTTGCGGTATTTTATTGCTGTCGCGGAAGAGCTGCACTTTGGCCGGGCAGCTGAACGCTT
GCATATTTCTCAACCCCCCCTGAGCCAGCAAATCCAAATCCTTGAAGAACAGATTGGGGCCCGCTTATTGGCACGAAATA
AGCGTAATATCAGTCTCACCCAAGCGGGAAAGCTCTTTTTAAAAGAGTCCTACCAAATTTTGGCACAGGTCAACTCTGCA
ACTGAGAAAGCAGCCTGTCTACATCGTGGGGAGTCGGGAGTGCTGACGATCGGTTTCACTTCATCGGCACCATTGATCAA
TGTCGTTTCTAAGAATTTGCGTACTTTTCGGCAAATATATCCACAAGTACATATAAAAATGCAGGAGGTAAGTACCAAAC
AGCAAATTGAAGCATTACTCGACGGGCGGTTAGATCTAGGTATTATGCGTAATACTCGGCTGCCTGAGGCATTACAATAT
CGATTGCTATTACGTGAACCTCTGGTCGCTGTCGTCCATGAAGATCATCCATTAGCCTCCCTACCAAATGGCAGTGTCAA
ATTTAGCTCACTGGACAAACAACCTTTTGTCTTCTTTTCACGTGAAGTGGGGACTGCACTTTATGACGAATTCTTTACCT
TATTAACCCGCGCGGGGATCACACCTTATATTACGCAGGAGGTCGGCGAGGCGATGACCATCATAGGCTTGGTATCATCT
GGTCTGGGGGTTTCAATCCTGCCCGCCTCGTTTAGGCGAGTAAACGTTGATGGTGTCAAATACTTATCACTGGACGAAGC
TGATGCGACGACAGAAATGTGGTTGGTTAATCATAAGCATCGTCCGATGCCCCCCCTGCAGAAGCATTGCTCCGTTTGA

Protein sequence :
MSIELRHLRYFIAVAEELHFGRAAERLHISQPPLSQQIQILEEQIGARLLARNKRNISLTQAGKLFLKESYQILAQVNSA
TEKAACLHRGESGVLTIGFTSSAPLINVVSKNLRTFRQIYPQVHIKMQEVSTKQQIEALLDGRLDLGIMRNTRLPEALQY
RLLLREPLVAVVHEDHPLASLPNGSVKFSSLDKQPFVFFSREVGTALYDEFFTLLTRAGITPYITQEVGEAMTIIGLVSS
GLGVSILPASFRRVNVDGVKYLSLDEADATTEMWLVNHKHRPMPPLQKHCSV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
stmR AAK97547.1 StmR Not tested SPI-6 Protein 3e-38 41