Gene Information

Name : YPC_1538 (YPC_1538)
Accession : YP_005623443.1
Strain : Yersinia pestis Harbin 35
Genome accession: NC_017265
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1504813 - 1506069 bp
Length : 1257 bp
Strand : -
Note : -

DNA sequence :
ATGGATTTCTTTCGTTTCTTAATGAGTGATGTGCTTTCTGAACCCGCAATACTGGTCGGTCTGATCGCTTTGATTGGCCT
TATTGCCCAGAAAAAACCGGTGACTGAATGTATTAAAGGCACCGTCAAAACCATTATGGGTTTTGTGATTTTGGGTGCAG
GCGCTGGCCTGGTGGTTTCATCTCTGGGTGATTTTGCCAATATCTTCCAACAGGCTTTCGGTATTCAGGGCGTAGTGCCA
AATAACGAAGCTATTGTTTCTGTGGCACAGAAGAGTTTCGGCAAAGAAATGGCGATGATTATGTTCTTCGCTATGGTGAT
CAATATCCTGATTGCCCGTTTTACGCCGTGGAAATTTATCTTCCTGACCGGTCACCACACGCTGTTTATGTCCATGATGG
TGGCTGTGATTCTGGCAACTGCTGGGCTAAGTGGCATGATGCTGATTGCCATCGGTTCCGTGGTTGTTGGGGTAGCGATG
GTCTTCTTCCCTGCCATTGCCCACCCTTACATGAAGAAGGTGACAGGATCTGATGATGTAGCCATCGGTCACTTCTCTAC
CCTCTCCTATGTATTGGCTGGTTTTATCGGCAGTAAGTTTGGTAATAAAGAACATTCGACTGAAGACATGAACGTGCCGA
AAAGTCTGTTGTTCTTGCGTGATACACCGGTCGCGATCTCCTTTACCATGTGTATCATTTTTGTCGTTACCTGCCTGTTT
GCCGGGCCGGAAGTGGTGAAAAGCCTGAGTGGCGGTAAAAACTGGTTCATGTTCTCATTGATGCAATCCATCACCTTTGC
CGCAGGGGTTTATATTATTCTGCAAGGTGTTCGGATGGTGATTGCCGAGATCGTGCCTGCTTTTAAAGGGATTTCAGACA
AGTTAGTGCCTAATGCAAAACCTGCGTTAGATTGCCCGGTTGTCTTCCCTTACGCACCCAATGCGGTACTGGTTGGCTTC
CTGAGCAGCTTTGCCGCTGGCCTGATCGGTATGTTCGCGTTGTATTTGTTGAATATGACCGTGATCATCCCAGGCGTCGT
CCCTCACTTCTTCGTAGGTGCTGCCGCAGGGGTGTTTGGTAATGCTACCGGCGGGCGTCGCGGGGCGATTCTCGGTGCAT
TTGCTCAAGGTCTGTTAATTACCTTCCTGCCCGTCTTCCTGCTGCCAGTCTTAGGCGATATTGGTTTTGCCAATACCACA
TTTAGTGATGCAGATTTTGGTGCGCTGGGTATTTTACTGGGGATTATCGTTCGATAA

Protein sequence :
MDFFRFLMSDVLSEPAILVGLIALIGLIAQKKPVTECIKGTVKTIMGFVILGAGAGLVVSSLGDFANIFQQAFGIQGVVP
NNEAIVSVAQKSFGKEMAMIMFFAMVINILIARFTPWKFIFLTGHHTLFMSMMVAVILATAGLSGMMLIAIGSVVVGVAM
VFFPAIAHPYMKKVTGSDDVAIGHFSTLSYVLAGFIGSKFGNKEHSTEDMNVPKSLLFLRDTPVAISFTMCIIFVVTCLF
AGPEVVKSLSGGKNWFMFSLMQSITFAAGVYIILQGVRMVIAEIVPAFKGISDKLVPNAKPALDCPVVFPYAPNAVLVGF
LSSFAAGLIGMFALYLLNMTVIIPGVVPHFFVGAAAGVFGNATGGRRGAILGAFAQGLLITFLPVFLLPVLGDIGFANTT
FSDADFGALGILLGIIVR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
vpeC ADD91725.1 putative PTS system-specific IIC component VpeC Virulence PAI-I AL862 Protein 7e-168 96
ORF8 AAK27335.1 unknown Not tested PAI-I AL862 Protein 9e-168 96
unnamed CAC39291.1 hypothetical protein Not tested LPA Protein 7e-168 96