Gene Information

Name : Zmob_1156 (Zmob_1156)
Accession : YP_005621437.1
Strain : Zymomonas mobilis ATCC 10988
Genome accession: NC_017262
Putative virulence/resistance : Virulence
Product : FliI/YscN family ATPase
Function : -
COG functional category : -
COG ID : -
EC number : 3.6.3.14
Position : 1333079 - 1334410 bp
Length : 1332 bp
Strand : +
Note : SMART: AAA ATPase; TIGRFAM: ATPase, FliI/YscN family; KEGG: zmn:Za10_0626 ATPase, FliI/YscN family; PFAM: H+transporting two-sector ATPase alpha/beta subunit central region

DNA sequence :
ATGAGTGAAAGCCTAGCCGCTTATGCCGGACGTATTCTTGGCCATGTCTCGATTGATGAAGGAACACCTCGGTGGATTGG
TAAACTTGTTGCTTATGATGGCTTGATGCTGGAAGCAACAGGCTTTCCTATGCCTATTGGGCATGGTGCTCTTATTATGG
ATGCTAATGGCCAATCATCACGTGCTGAAGTGGTTGGGTTCCGTGGTAATACAACGTTGCTTATGGCGTTAGATGCTGAT
GCACCTCATAATCCTGGAGCCAGAGTTGAGCCGGATAGACAGTTAAGCATTGTCCATGTTGGCGATGGTCTATTAGGACG
TGTTATAGGTGCGTTGGGCGAGCCTCTTGATAACTTAGGCCCTATTATCACTGACGAATATTGGCCATTGGTCGGAAAAA
TGGGGAATCCTCTCAATCGAGGGCGTGTAACGCAGCCTTTTGATATGGGGGTTCGGGCAATCAATGCCTTGCTAACGGCT
GGTGTCGGGCAAAGAATTGCTATCATGGCGGGGTCAGGGGTTGGTAAATCTGTCCTGATGGGGCAGATGATTGCCGGCGC
GAAGGCTGATGTTATTGTAACGGGGTTGATCGGAGAGCGATCGCGTGAAGTAACTGATTTCGTTGAAACCAAAATTAGTG
ATGATGTTCGACCAAAAAGTGTTGTCGTGGCAGTTCCTGCTGACCATCCTCCAGTTTTACGCTTGAGGGCGGCAATGCGG
GCAACTGCGATTGCCGAATATTTTCGAGCGAAGGGTAAAAATGTTCTTTTACTGATCGACAGCTTGACCCGTATTGCGCA
TGCACAACGGGAAGTAGGTCTGTCACTTGGTGAACCTCCTACGATCAAAGGCTATCCACCCTCGGCTTTAGGGCTTATTC
CTCGTTTGGTTGAAAGAGCGGGTATCGATATTCATTCAAAAGGCGCGATTACCGCTATTTATACGGTCTTGGCTGACGGT
GATGATCCTGACGATCCAATCGTTGATACCGCACGAGCCATTGTTGACGGGCATATTATCTTATCTCGTTCACTGGCAGA
ACAAGGCGTTTTTCCTGCTATTGATCTCGGTAAGTCGCTTTCTCGTGTCATGAGCGATATTATTTCGCCTGGACATAGAC
AGGCAGCAGCCCATCTGCGCCGTTTATGGTCTGTTTATGAAGAAAATCGTGATCTTATCTTAATGGGTGCCTATCGTAGC
GGCACAGATGCTTCTATTGATGAAGCCATCAATCGTCACAATGATGTTTTAGACTTTATTCGCCAAGGGCAAAATGAAAG
AATTGACCTCGCCACGTCTATTGCGACTTTGATGGAAAGGTTTGCCGTATGA

Protein sequence :
MSESLAAYAGRILGHVSIDEGTPRWIGKLVAYDGLMLEATGFPMPIGHGALIMDANGQSSRAEVVGFRGNTTLLMALDAD
APHNPGARVEPDRQLSIVHVGDGLLGRVIGALGEPLDNLGPIITDEYWPLVGKMGNPLNRGRVTQPFDMGVRAINALLTA
GVGQRIAIMAGSGVGKSVLMGQMIAGAKADVIVTGLIGERSREVTDFVETKISDDVRPKSVVVAVPADHPPVLRLRAAMR
ATAIAEYFRAKGKNVLLLIDSLTRIAHAQREVGLSLGEPPTIKGYPPSALGLIPRLVERAGIDIHSKGAITAIYTVLADG
DDPDDPIVDTARAIVDGHIILSRSLAEQGVFPAIDLGKSLSRVMSDIISPGHRQAAAHLRRLWSVYEENRDLILMGAYRS
GTDASIDEAINRHNDVLDFIRQGQNERIDLATSIATLMERFAV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
hrcN NP_640767.1 type III secretion system ATPase Virulence Hrp PAI Protein 5e-70 47
hrcN AAP34339.1 HrcN Virulence Hrp PAI Protein 2e-70 46
hrpB6 BAB07852.1 HrpB6 Virulence Hrp PAI Protein 9e-71 46
hrpB6 AAF61281.1 HrpB6 Virulence Hrp PAI Protein 9e-71 46
hrcN YP_198730.1 type III secretion system ATPase Virulence Hrp PAI Protein 1e-70 46
hrcN YP_362163.1 type III secretion system ATPase Virulence Hrp PAI Protein 4e-69 46
hrpB6 AAB08461.1 HrpB6 Virulence Hrp PAI Protein 3e-69 46
lscN AAO18044.1 LscN Virulence TTSS locus Protein 2e-67 46
hrcN NP_636610.1 type III secretion system ATPase Virulence Hrp PAI Protein 3e-68 45
XC_3006 YP_244074.1 type III secretion system ATPase Virulence Hrp PAI Protein 3e-68 45
escN AFO66300.1 putative LEE-encoded type III secretion system ATPase Virulence SESS LEE Protein 4e-62 45
escN AFO66415.1 putative LEE-encoded type III secretion system ATPase Virulence SESS LEE Protein 4e-62 45
ssaN NP_805086.1 type III secretion system ATPase Virulence SPI-2 Protein 7e-63 45
ssaN NP_460380.1 type III secretion system ATPase Virulence SPI-2 Protein 1e-62 45
ssaN CAA70537.1 secretion system apparatus Virulence SPI-2 Protein 1e-62 45
ssaN YP_216423.1 type III secretion system ATPase Virulence SPI-2 Protein 1e-62 45
ssaN NP_456113.1 putative type III secretion ATP synthase Virulence SPI-2 Protein 7e-63 45
escN YP_003223475.1 translocator EscN Virulence LEE Protein 1e-63 44
unnamed AAL06369.1 EscN Virulence LEE Protein 5e-62 44
escN CAI43874.1 EscN protein Virulence LEE Protein 8e-64 44
hrcN AAR25633.1 type III secretion cytoplasmic ATPase HrcN Not tested Not named Protein 4e-57 43
YPO0267 YP_002345348.1 type III secretion system ATPase Virulence Not named Protein 2e-64 43
hrcN AAG33879.1 HrcN Virulence Hrp PAI Protein 6e-59 42
hrcN AAB06001.1 HrcN Virulence Hrp PAI Protein 2e-58 42
invC YP_217813.1 ATP synthase SpaL Virulence SPI-1 Protein 1e-48 42
spaI NP_457288.1 secretory apparatus ATP synthase (associated with virulence) Virulence SPI-1 Protein 1e-48 42
spaI NP_806497.1 ATP synthase SpaL Virulence SPI-1 Protein 1e-48 42
invC NP_461815.1 ATP synthase SpaL Virulence SPI-1 Protein 1e-48 42
escN AAC31513.1 L0034 Virulence LEE Protein 7e-64 41
unnamed ACU09458.1 type III secretion apparatus H+-transporting two-sector ATPase Virulence LEE Protein 7e-64 41
escN YP_003236088.1 translocator EscN Virulence LEE Protein 3e-63 41
escN CAC81862.1 EscN protein Virulence LEE II Protein 7e-64 41
escN AAK26715.1 EscN Virulence LEE Protein 6e-64 41
escN NP_290268.1 hypothetical protein Virulence LEE Protein 1e-63 41
escN AAL57542.1 EscN Virulence LEE Protein 6e-64 41
ECs4568 NP_312595.1 EscN Virulence LEE Protein 1e-63 41
escN YP_003232153.1 T3SS structure protein EscN Virulence LEE Protein 9e-64 41
escN AAC38383.1 EscN Virulence LEE Protein 5e-64 41
hrcN NP_791227.1 type III secretion cytoplasmic ATPase HrcN Virulence Hrp PAI Protein 4e-59 41
hrcN AAT96141.1 HrcN Virulence T-PAI Protein 2e-59 41
hrcN AAT96195.1 HrcN Virulence T-PAI Protein 1e-59 41
hrcN ABQ88354.1 HrcN Virulence Hrp PAI Protein 2e-52 41
hrpJ4 AAA81942.1 HrpJ4 Virulence Hrp PAI Protein 2e-52 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Zmob_1156 YP_005621437.1 FliI/YscN family ATPase VFG1254 Protein 9e-81 49
Zmob_1156 YP_005621437.1 FliI/YscN family ATPase VFG2499 Protein 4e-73 49
Zmob_1156 YP_005621437.1 FliI/YscN family ATPase VFG2331 Protein 6e-74 47
Zmob_1156 YP_005621437.1 FliI/YscN family ATPase VFG0390 Protein 6e-66 45
Zmob_1156 YP_005621437.1 FliI/YscN family ATPase VFG0192 Protein 1e-65 45
Zmob_1156 YP_005621437.1 FliI/YscN family ATPase VFG0515 Protein 6e-63 45
Zmob_1156 YP_005621437.1 FliI/YscN family ATPase VFG0048 Protein 4e-70 43
Zmob_1156 YP_005621437.1 FliI/YscN family ATPase VFG1008 Protein 1e-57 43
Zmob_1156 YP_005621437.1 FliI/YscN family ATPase VFG0555 Protein 6e-49 42
Zmob_1156 YP_005621437.1 FliI/YscN family ATPase VFG0812 Protein 4e-64 41
Zmob_1156 YP_005621437.1 FliI/YscN family ATPase VFG0730 Protein 3e-64 41