Gene Information

Name : dnaB (BUAMB_521)
Accession : YP_005620249.1
Strain : Buchnera aphidicola Ua
Genome accession: NC_017259
Putative virulence/resistance : Unknown
Product : replicative DNA helicase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 558400 - 559797 bp
Length : 1398 bp
Strand : +
Note : -

DNA sequence :
ATGGTATATGCAATAAATATGACTAAAAATAAATTATATTTAAATCAAATTAATAGATTAAAAATTCCACCACATTCTCT
AGAAGCAGAGCAATCAGTATTAGGTGGATTAATGTTAGATAATGAACAATGGGACAATGTTTCAGAACATGTAGTTGCTG
ATGATTTTTTTAGTAAACCTCATAAATTAATATTTCAAGAAATGCAAAAATTGCTTGACTTAGGATATCCAATAGATTTA
ATTACTCTTTCTGAATCTTTAGAACAAAAAGGAAAATTAGAAAGTGTAGGTAGATTTTCATATTTAGCAGAATTATCAAA
AAATACACCCAGTACAGCAAATATTACTGCATATGCTGATATTGTTCGAGAACGTGCTATAGTAAGAGAAATGATATTAG
TAGCTAATAAAATCGCTAATGCTGGATATGATACACAAGGTAGAAAAAGTGAAGAATTGTTAGATTATGCAGAATCTAGT
GTGTTTAAAATTGCAGAAAAACGCTTTAAAAAAGATTCAGGACCAAAAAATATTGAACAAATTCTTGATGAAACAATTAC
TAGCATTGAAAAATTGTTTTTATCACCACATGATGGAGTGACAGGGATTAATACTGGATATCAAGATTTGAATAAAAAAA
CGTCAGGTTTACAACATTCTGAATTAATTATTATTGCAGCTAGACCTTCTATGGGAAAAACAACGTTTGCTATGAATTTA
TGTGAAAATGCTGCTATGCTGTACGATAAACCTGTATTAATATTTAGTTTAGAAATGCCTGGTGAACAAATTATGATGCG
TATGTTAGCTTCTTTATCACGAGTTAATCAAACAAACATTAGAACAGGGCAATTAAATAATGAAGATTGGGCTCGAATAT
CTGGAACTATCAATATATTACTTAAAAAAAAGAATATTTATATTGATGATTCTTCAGCACTGACTCCTAGTGAAGTACGT
TCACGAGCGCGTCGTATTTATCGTGAAAATAATGGATTAACTTTAATTATGGTGGATTATTTACAACTAATGAGAGTACC
TTCACTATCTGAAAATCGTACACTAGAAATTGCAGAAATATCTAGAACGTTAAAAGCATTAGCAAAAGAATTGCAAGTTC
CAGTAATAGCATTATCACAACTAAATCGTTCTTTAGAACAAAGATCAGACAAAAGACCAGTGAATTCTGATTTACGTGAA
TCAGGCTCTTTAGAACAAGATGCAGATTTAATAATGTTTATATACCGTGATGAAATTTATAATGAAAATAGTGATTTTAA
AGGCATTGCTGAAATTATAATAGGAAAACAACGTAATGGTCCAATTGGTACAATTCGTTTAACTTTTAATGGACATTGGT
CTAGATTTGATAATTATGCAGGTCCAAAATATGATTAA

Protein sequence :
MVYAINMTKNKLYLNQINRLKIPPHSLEAEQSVLGGLMLDNEQWDNVSEHVVADDFFSKPHKLIFQEMQKLLDLGYPIDL
ITLSESLEQKGKLESVGRFSYLAELSKNTPSTANITAYADIVRERAIVREMILVANKIANAGYDTQGRKSEELLDYAESS
VFKIAEKRFKKDSGPKNIEQILDETITSIEKLFLSPHDGVTGINTGYQDLNKKTSGLQHSELIIIAARPSMGKTTFAMNL
CENAAMLYDKPVLIFSLEMPGEQIMMRMLASLSRVNQTNIRTGQLNNEDWARISGTINILLKKKNIYIDDSSALTPSEVR
SRARRIYRENNGLTLIMVDYLQLMRVPSLSENRTLEIAEISRTLKALAKELQVPVIALSQLNRSLEQRSDKRPVNSDLRE
SGSLEQDADLIMFIYRDEIYNENSDFKGIAEIIIGKQRNGPIGTIRLTFNGHWSRFDNYAGPKYD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
PMI2640 YP_002152342.1 DNA helicase Not tested Not named Protein 1e-95 52
api2 CAF28476.1 putative DNA binding protein with DNA-dependent ATPase activity Not tested YAPI Protein 3e-97 51
dnaB2 YP_001402701.1 replicative DNA helicase Not tested YAPI Protein 9e-97 51
dnaB2 YP_001007676.1 putative DNA helicase Not tested YAPI Protein 2e-96 51
unnamed ABR13456.1 replicative DNA helicase Not tested PAGI-5 Protein 2e-92 48
STY4522 NP_458617.1 DNA helicase Not tested SPI-7 Protein 2e-85 48
t4227 NP_807829.1 DNA helicase Not tested SPI-7 Protein 2e-85 48
dnaB CAI36044.1 replicative DNA helicase DnaB Not tested PPHGI-1 Protein 9e-78 45
dnaB1 YP_005176258.1 replicative DNA helicase Not tested ICEPmu1 Protein 1e-72 42