Gene Information

Name : fliI (BAKON_076)
Accession : YP_005619269.1
Strain : Buchnera aphidicola Ak
Genome accession: NC_017256
Putative virulence/resistance : Virulence
Product : flagellum-specific ATP synthase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 80369 - 81730 bp
Length : 1362 bp
Strand : +
Note : APS ortholog shorter than E. coli

DNA sequence : 
ATGAATTTAAGATTCGCTCAATTTTTAAAAAAATTTTCTTCTTTTGAAAGCAGAATTGAGAAGCTGTCTGATATAATTAA
TTATGGTCGTCTTGTGAGTATTAATGGATTAGTTGTAGAAGTTGTAGGATTAAGAATGCCTATTGGTTCAGAATGTTTTA
TTGAAAGAATAATAGATGGTAAAAATTTAAATATTCATGCTGAAGTGATAGGTTTTTCAGGAAAAAAAACTATATTATTA
TCTTTTGAAGAAATTGATGGAGTTTTTCCTGGTGCGCGTGTTTTTTCAAAATTAGGAAATGATGCAAATTCTATTATAAA
AAAAATGCCGTTAAGCATAAAATTATTAGGAAGAGTATTAAATGGTCGAGGTCAACCATTAGATCAACTACCTAAAATTG
ATCATAAATATTACACTATTATCAAAAATTATAATATCAACCCATTAAATAGAACACCTATTACTGAAATATTAGATACT
GGAATACGTGCTATTAATGGACTCTTAACTATTGGTAGAGGCCAAAAAATAGGAATTTTTTCAAGTTCAGGCATTGGTAA
AAGTATTTTACTCGGTATGATGGCAAGATATACAAAAGCTGATGTTATTGTTATTGCTTTAATTGGAGAACGAGGTCGAG
AAGTAAAAGATTTTATAGAAAACATATTAGGTGTTGAGGGATTATCACGATCAGTAGTAATTGCAGCTCCTGCAGATGTC
TCTCCCTTGTTAAAAATACAAGCAGCATCTTATGCTGCTAATATTGCAGAATATTTTTATAAAAAAAATAAACATGTATT
ACTAATTATGGATTCTTTAACTCGTTACGCTATGGCACAACGAGAAATTTCATTATCTTTAGGAGAACTGCCTGTTTCTA
AGGGGTATCCATCTTCTATATTTTCAAAAATTCCAAATTTAGTAGAGCGTACAGGAGTTTATAATAAAAACAAAGGTTCC
ATTACTTCATTTTATACCGTTCTCACTGAAGGAGAAGATGAACAGGATCCAGTATCACATCTTGCTCGTTCTATATTAGA
TGGACATATTATACTATCTCGTTATTATGCTGATTTAGGTCACTATCCTGCAATTGATATTGAATCTTCTATTAGTCGTG
TTATGCCTAATATAATTAATTCTACTCAGAATCATCAAGCTTTGTATTTTAAAAAACTAGTTGCTTCTTATCAAAGAAAT
AGAGAATTAATAAATATAGGTGCGTATATTACTGGCACTGATTTAGTTTTAGATCACGCTATTAAAATTTGGCCAAAATT
AGAAAAATTTTTGCAACAAGAAATATCAGAAAAAAGTGATTATTCTTTTTCTTGTCAAGAGTTAAATAAAATATTTCTTT
AA

Protein sequence : 
MNLRFAQFLKKFSSFESRIEKLSDIINYGRLVSINGLVVEVVGLRMPIGSECFIERIIDGKNLNIHAEVIGFSGKKTILL
SFEEIDGVFPGARVFSKLGNDANSIIKKMPLSIKLLGRVLNGRGQPLDQLPKIDHKYYTIIKNYNINPLNRTPITEILDT
GIRAINGLLTIGRGQKIGIFSSSGIGKSILLGMMARYTKADVIVIALIGERGREVKDFIENILGVEGLSRSVVIAAPADV
SPLLKIQAASYAANIAEYFYKKNKHVLLIMDSLTRYAMAQREISLSLGELPVSKGYPSSIFSKIPNLVERTGVYNKNKGS
ITSFYTVLTEGEDEQDPVSHLARSILDGHIILSRYYADLGHYPAIDIESSISRVMPNIINSTQNHQALYFKKLVASYQRN
RELINIGAYITGTDLVLDHAIKIWPKLEKFLQQEISEKSDYSFSCQELNKIFL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
YPO0267 YP_002345348.1 type III secretion system ATPase Virulence Not named Protein 6e-65 45
XC_3006 YP_244074.1 type III secretion system ATPase Virulence Hrp PAI Protein 2e-67 44
hrcN NP_636610.1 type III secretion system ATPase Virulence Hrp PAI Protein 2e-67 44
lscN AAO18044.1 LscN Virulence TTSS locus Protein 6e-64 43
hrpB6 AAB08461.1 HrpB6 Virulence Hrp PAI Protein 4e-68 43
hrcN YP_362163.1 type III secretion system ATPase Virulence Hrp PAI Protein 5e-68 43
hrpB6 BAB07852.1 HrpB6 Virulence Hrp PAI Protein 4e-70 43
hrcN NP_640767.1 type III secretion system ATPase Virulence Hrp PAI Protein 1e-68 43
hrpB6 AAF61281.1 HrpB6 Virulence Hrp PAI Protein 4e-70 43
hrcN YP_198730.1 type III secretion system ATPase Virulence Hrp PAI Protein 5e-70 43
escN AFO66300.1 putative LEE-encoded type III secretion system ATPase Virulence SESS LEE Protein 2e-61 43
escN AFO66415.1 putative LEE-encoded type III secretion system ATPase Virulence SESS LEE Protein 2e-61 43
escN CAC81862.1 EscN protein Virulence LEE II Protein 1e-57 43
escN AAC31513.1 L0034 Virulence LEE Protein 1e-57 43
escN YP_003232153.1 T3SS structure protein EscN Virulence LEE Protein 2e-57 43
unnamed ACU09458.1 type III secretion apparatus H+-transporting two-sector ATPase Virulence LEE Protein 1e-57 43
escN NP_290268.1 hypothetical protein Virulence LEE Protein 1e-57 43
escN AAK26715.1 EscN Virulence LEE Protein 9e-58 43
ECs4568 NP_312595.1 EscN Virulence LEE Protein 1e-57 43
escN AAL57542.1 EscN Virulence LEE Protein 9e-58 43
escN YP_003236088.1 translocator EscN Virulence LEE Protein 1e-57 43
escN CAI43874.1 EscN protein Virulence LEE Protein 8e-58 43
unnamed AAL06369.1 EscN Virulence LEE Protein 5e-57 43
escN YP_003223475.1 translocator EscN Virulence LEE Protein 1e-57 43
escN AAC38383.1 EscN Virulence LEE Protein 2e-57 43
hrcN AAP34339.1 HrcN Virulence Hrp PAI Protein 1e-69 42
ssaN NP_805086.1 type III secretion system ATPase Virulence SPI-2 Protein 2e-57 42
ssaN YP_216423.1 type III secretion system ATPase Virulence SPI-2 Protein 9e-58 42
ssaN NP_460380.1 type III secretion system ATPase Virulence SPI-2 Protein 3e-57 42
ssaN CAA70537.1 secretion system apparatus Virulence SPI-2 Protein 2e-57 42
ssaN NP_456113.1 putative type III secretion ATP synthase Virulence SPI-2 Protein 2e-57 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
fliI YP_005619269.1 flagellum-specific ATP synthase VFG2331 Protein 5e-119 57
fliI YP_005619269.1 flagellum-specific ATP synthase VFG2499 Protein 4e-110 53
fliI YP_005619269.1 flagellum-specific ATP synthase VFG1254 Protein 1e-98 49
fliI YP_005619269.1 flagellum-specific ATP synthase VFG0390 Protein 5e-64 43
fliI YP_005619269.1 flagellum-specific ATP synthase VFG0812 Protein 6e-58 43
fliI YP_005619269.1 flagellum-specific ATP synthase VFG0730 Protein 1e-57 43
fliI YP_005619269.1 flagellum-specific ATP synthase VFG2144 Protein 4e-68 42
fliI YP_005619269.1 flagellum-specific ATP synthase VFG0192 Protein 3e-67 42
fliI YP_005619269.1 flagellum-specific ATP synthase VFG0515 Protein 1e-57 42
fliI YP_005619269.1 flagellum-specific ATP synthase VFG0048 Protein 2e-66 41