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Name : lysS (CWQ_02335) Accession : YP_005617396.1 Strain : Buchnera aphidicola TLW03 Genome accession: NC_017252 Putative virulence/resistance : Virulence Product : lysyl-tRNA synthetase Function : - COG functional category : - COG ID : - EC number : 6.1.1.6 Position : 477359 - 478879 bp Length : 1521 bp Strand : + Note : COG1190 Lysyl-tRNA synthetase (class II) DNA sequence : ATGTCTGAAATAGAAAAAAGAAATCATGCTGATTGTAATATTTTATACAAAGAAATAAAAAAAAGAGAACAAAAACTTGT TAATATGAAAAAAGAAGGATTTTCTTTCCCGAATAGTTTTAAAAAAAATACTACTTCAAGAAAAATTTATCAAAAATACC AAACAAAAAATAGAAATGAACTCATATCATTAAATATTGAAGTTTCCATTGCTGGTCGTATGGTGCAAAGACGTATTATG GGAAAAGCTTCTTTTTTTACCTTGCAAGATATAGAAGGAAAAATACAAATTTATATAAATGAAAAAAAAATATCATCTGA TTTTTATCGCTTTCACTTTAAAAAGTGGGATATCGGAGATATTTTGGGTGTGATAGGAACATTATTTAAAACTAAAACAG GTGAATTATCTATTTATTGTAAAAATGTAACAATACTTAATAAATCATTAAAACCTTTACCAGACAAGTTTCATGGTTTA TCTAATCAAGAAATACGTTATCGGAAAAGATATCTAGATTTAATTAGTAATAATAAATTATATAGTATTTTTAAAAATCG TTCTAATATTATCACAGCGATTCGTAATTTCATGATAGAAAATGATTTTTTAGAAGTCGAAACTCCAATGCTACAAAATA TTCCTGGAGGAGCTAATGCTCGTCCTTTTATTACTTATCATAATGAAATTGATTCTCAAATGTATTTAAGAATAGCTCCT GAATTATATTTAAAAAAACTAATTATTGGGGGATTTGAACGTATTTTTGAACTGAATAGAAACTTTCGTAACGAAGGAGT ATCAGCTCGTCATAATCCAGAATTTACTATGATGGAAGCATACATTGCATATTCTAACTATGAAGATATGATGGAATTAA CAGAAAATCTTTTTAAAAGTATTACAAAGTTTCTTTTTCAAGATAATAAAATTATATTCAACAACAATAATTTTGATTTC AGTCAACCATTTCGTAGATTAACTATGACAGATTCTATTCTTGAGTTTAATTCAACTATTACCTCATCCGATTTAAAAGA TTTTTATAAAATCAGAGAATTTGCAAAATCTATAGGAATAAAAGTAGAAAAAAAATGGGGTTGCGGCCAGATAGAAACTG AAATATTTGAAAAGACAGTAGAAAAAAAATTAATTCAACCAACTTTTATTACACAATACCCAGTAGAAGTTTCTCCATTG GCAAGACGTAATGACATAAATTTAAATATAACTGATAGATTTGAACTTTTTATTGGTGGATATGAAATAGGAAATGGATT TTCAGAACTAAATGATGTAGAAGATCAAAAAACACGATTTTTAAATCAAATTCAAAAATCAAATAAGGAAGATAATAAAA ATCTATTTTACGATAAAGAGTATATAGAAGCGTTACAATATGGTTTACCTCCAACATCTGGATTAGGAATAGGAATAGAT CGTTTAATTATGATATTAACTAATCAAATCAGCATTCGTGATGTAATTTTATTTCCAACACTTCGTCCATTTAAAAAATA G Protein sequence : MSEIEKRNHADCNILYKEIKKREQKLVNMKKEGFSFPNSFKKNTTSRKIYQKYQTKNRNELISLNIEVSIAGRMVQRRIM GKASFFTLQDIEGKIQIYINEKKISSDFYRFHFKKWDIGDILGVIGTLFKTKTGELSIYCKNVTILNKSLKPLPDKFHGL SNQEIRYRKRYLDLISNNKLYSIFKNRSNIITAIRNFMIENDFLEVETPMLQNIPGGANARPFITYHNEIDSQMYLRIAP ELYLKKLIIGGFERIFELNRNFRNEGVSARHNPEFTMMEAYIAYSNYEDMMELTENLFKSITKFLFQDNKIIFNNNNFDF SQPFRRLTMTDSILEFNSTITSSDLKDFYKIREFAKSIGIKVEKKWGCGQIETEIFEKTVEKKLIQPTFITQYPVEVSPL ARRNDINLNITDRFELFIGGYEIGNGFSELNDVEDQKTRFLNQIQKSNKEDNKNLFYDKEYIEALQYGLPPTSGLGIGID RLIMILTNQISIRDVILFPTLRPFKK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | CAD66193.1 | putative lysil-tRNA synthetase LysU | Not tested | PAI III 536 | Protein | 1e-128 | 53 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| lysS | YP_005617396.1 | lysyl-tRNA synthetase | VFG1668 | Protein | 7e-129 | 53 |
