Gene Information

Name : BS1330_I0608 (BS1330_I0608)
Accession : YP_005615450.1
Strain :
Genome accession: NC_017251
Putative virulence/resistance : Virulence
Product : DNA-binding response regulator
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 601641 - 602348 bp
Length : 708 bp
Strand : +
Note : identified by match to protein family HMM PF00072; match to protein family HMM PF00486; corresponds to BR0612

DNA sequence : 
ATGAAAATTCTCGTTATCGAAGATGACCGCGAAGCGGCCCGTTATCTGGAAAAGGCCTTTGCCGAGGCAGGGCATTCGGC
CGATATCGCGGGCGACGGCGAAACCGGCTACGCACTTGCCGAAAACGGCAATTACGATGTGCTGGTGGTGGACCGTATGC
TGCCCAAACGCGACGGCCTTTCCGTTGTGGCGGGCCTGCGCGCCAAGGGCATGGAAACGCCGGTCCTGATCCTGTCGGCG
CTTGGCGAGGTGGATGACCGCGTGACCGGCCTGCGCGCTGGGGGCGATGATTATCTCACCAAGCCCTATGCTTTTTCCGA
ACTTCTGGCGCGTGTCGAGGTCTTGCAGCGCCGCTCAAGCCCGCGCGAGGCGGATACGATCTACCGCGTCGGCGATCTGG
AGCTTGACCGCCTTGCGCATACTGCGCGCCGCCAGAGTGTTGATATTACGCTTCAACCGCGAGAATTTCGTCTTCTCGAA
TATCTCATGCGCCATGCCGGGCAGGTCGTCACCCGCACCATGCTGCTTGAAAACGTCTGGGATTACCACTTCGACCCGCA
GACCAATGTGATCGATGTTCACATTTCGCGGCTGCGCTCCAAGATTGAAAAGGGCTTTGACGAGCCGCTGCTTCATACGG
TGCGCGGGGCTGGCTATATGCTGAAGGCGGGCCGGGGCAAGCAATCCGCTGCCGCAAGGGCGGAATGA

Protein sequence : 
MKILVIEDDREAARYLEKAFAEAGHSADIAGDGETGYALAENGNYDVLVVDRMLPKRDGLSVVAGLRAKGMETPVLILSA
LGEVDDRVTGLRAGGDDYLTKPYAFSELLARVEVLQRRSSPREADTIYRVGDLELDRLAHTARRQSVDITLQPREFRLLE
YLMRHAGQVVTRTMLLENVWDYHFDPQTNVIDVHISRLRSKIEKGFDEPLLHTVRGAGYMLKAGRGKQSAAARAE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
copR NP_460069.2 transcriptional regulatory protein YedW Not tested SPI-5 Protein 4e-38 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
BS1330_I0608 YP_005615450.1 DNA-binding response regulator BAC0125 Protein 2e-51 48
BS1330_I0608 YP_005615450.1 DNA-binding response regulator BAC0083 Protein 1e-46 48
BS1330_I0608 YP_005615450.1 DNA-binding response regulator BAC0197 Protein 2e-45 47
BS1330_I0608 YP_005615450.1 DNA-binding response regulator BAC0111 Protein 1e-54 45
BS1330_I0608 YP_005615450.1 DNA-binding response regulator BAC0347 Protein 7e-48 45
BS1330_I0608 YP_005615450.1 DNA-binding response regulator BAC0308 Protein 2e-46 44
BS1330_I0608 YP_005615450.1 DNA-binding response regulator BAC0638 Protein 5e-38 44
BS1330_I0608 YP_005615450.1 DNA-binding response regulator NC_002516.2.879194.p Protein 7e-28 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
BS1330_I0608 YP_005615450.1 DNA-binding response regulator VFG1389 Protein 4e-36 45
BS1330_I0608 YP_005615450.1 DNA-binding response regulator VFG0596 Protein 2e-38 41
BS1330_I0608 YP_005615450.1 DNA-binding response regulator VFG1390 Protein 1e-38 41