Gene Information

Name : phoB (BS1330_I2137)
Accession : YP_005616942.1
Strain :
Genome accession: NC_017251
Putative virulence/resistance : Virulence
Product : phosphate regulon transcriptional regulatory protein Phob
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2066889 - 2067575 bp
Length : 687 bp
Strand : +
Note : identified by similarity to EGAD:5895; match to protein family HMM PF00072; match to protein family HMM PF00486; match to protein family HMM TIGR02154; corresponds to BR2143

DNA sequence : 
ATGTCCCAAGTACCCCGAATTGCTGTGGTTGAAGACGAAGAAGCACTGAGCGTGCTGCTGCGCTATAATCTCGAAGCTGA
GGGCTATCAGGTCGATACGATGTTGCGCGGGGATGAAGCCGAAATCGCGCTGCGTGAAAGCGTGCCCGATCTTCTGATCC
TGGACTGGATGCTGCCGGGCGTCTCCGGCATCGAGCTTTGCCGCCGCCTGCGGCAAAGACCGGAAACGGAACGCCTGCCG
ATCATCATGCTGACGGCGCGCGGCGAGGAGAGCGAGCGTGTACGGGGCCTGAGTGTCGGCGCGGATGATTATGTGGTGAA
GCCTTTCTCCACGCCGGAGCTGCTTGCCCGCGTCAAGGCGATGCTGCGCCGCGCGAACCCCAGCATCCTGTCCCATGTGC
TGAAGGTCGGCGACCTTTTGCTGGACCGCCAGCAGCACCGCGTCTATCGGAAGGAAAAGGAAGTCCACCTTGGCCCGACG
GAATTCCGTCTGCTCGAATATTTCATGATGTCGCCGGGCCGCGTTTTCTCGCGCAGCCAGCTTCTGGATGGTGTCTGGGG
GCCGGATATCTACGTCGATGACCGCACGGTAGACGTCCATGTGGGCCGTCTGCGCAAGGCCATCAATGTCGGCCGCGCCG
CCGATTCGATCCGCACCGTACGCGGCGCGGGATATTCGTTCGGCTGA

Protein sequence : 
MSQVPRIAVVEDEEALSVLLRYNLEAEGYQVDTMLRGDEAEIALRESVPDLLILDWMLPGVSGIELCRRLRQRPETERLP
IIMLTARGEESERVRGLSVGADDYVVKPFSTPELLARVKAMLRRANPSILSHVLKVGDLLLDRQQHRVYRKEKEVHLGPT
EFRLLEYFMMSPGRVFSRSQLLDGVWGPDIYVDDRTVDVHVGRLRKAINVGRAADSIRTVRGAGYSFG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
c3565 NP_755440.1 response regulator Not tested PAI I CFT073 Protein 6e-35 44
unnamed CAD42044.1 hypothetical protein Not tested PAI II 536 Protein 4e-35 43

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
phoB YP_005616942.1 phosphate regulon transcriptional regulatory protein Phob NC_010400.5986590.p0 Protein 4e-37 43
phoB YP_005616942.1 phosphate regulon transcriptional regulatory protein Phob NC_011595.7057856.p0 Protein 1e-37 43
phoB YP_005616942.1 phosphate regulon transcriptional regulatory protein Phob NC_010410.6002989.p0 Protein 1e-37 43
phoB YP_005616942.1 phosphate regulon transcriptional regulatory protein Phob HE999704.1.gene2815. Protein 9e-38 42
phoB YP_005616942.1 phosphate regulon transcriptional regulatory protein Phob AE000516.2.gene3505. Protein 5e-32 42
phoB YP_005616942.1 phosphate regulon transcriptional regulatory protein Phob CP000034.1.gene2186. Protein 2e-33 42
phoB YP_005616942.1 phosphate regulon transcriptional regulatory protein Phob NC_002695.1.916589.p Protein 2e-33 42
phoB YP_005616942.1 phosphate regulon transcriptional regulatory protein Phob BAC0596 Protein 1e-33 42
phoB YP_005616942.1 phosphate regulon transcriptional regulatory protein Phob BAC0039 Protein 2e-33 42
phoB YP_005616942.1 phosphate regulon transcriptional regulatory protein Phob CP001138.1.gene2239. Protein 1e-33 42
phoB YP_005616942.1 phosphate regulon transcriptional regulatory protein Phob CP001918.1.gene3444. Protein 4e-34 42
phoB YP_005616942.1 phosphate regulon transcriptional regulatory protein Phob NC_012469.1.7686381. Protein 1e-36 41
phoB YP_005616942.1 phosphate regulon transcriptional regulatory protein Phob AE016830.1.gene1681. Protein 4e-36 41
phoB YP_005616942.1 phosphate regulon transcriptional regulatory protein Phob CP000647.1.gene2531. Protein 3e-34 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
phoB YP_005616942.1 phosphate regulon transcriptional regulatory protein Phob VFG1702 Protein 2e-35 44
phoB YP_005616942.1 phosphate regulon transcriptional regulatory protein Phob VFG1563 Protein 2e-35 43
phoB YP_005616942.1 phosphate regulon transcriptional regulatory protein Phob VFG1390 Protein 4e-34 43