Gene Information

Name : BJ6T_86460 (BJ6T_86460)
Accession : YP_005613476.1
Strain : Bradyrhizobium japonicum USDA 6
Genome accession: NC_017249
Putative virulence/resistance : Unknown
Product : ABC transporter ATP-binding protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 8972168 - 8973787 bp
Length : 1620 bp
Strand : +
Note : -

DNA sequence :
ATGACCGCCCCGCCCGCCGTCTCCATCAAAAATTTGCGGATCGCGCTGCCCAAGGGCGCCGAGCGTCCGTTCGCGGTCGA
CGGCGTCTCGCTGGCTTTGCGGCCCGGCAAGATCGTCTGCGTCGTCGGCGAATCCGGCTCCGGCAAGTCGATGTGCGCGC
ACGCGCTGATGGGCCTGCTGCCTGATACGGTCACCGTCACCTCCGGCGAGATCCAGTTCGAAGGCCGCGACCTGCTCAAG
CTCGATGACGACGGCTGGCGCGATCTGCGCGGCCGCCGGCTCGCGATGATTTTTCAGGAGCCGATGACCGCGCTCAATCC
GTTGATGCGGATCGGCGACCAGATGGCGGAGATGTTCGAGGCCCATGGCCTGCTGACGCCGAAGGAGCGGCGCGCCAAGG
CCCTGTCGCTGGCGCGCGAGGTCGGCCTGCCCGACCCCGAGCGCATTGTCCGCGCCTATCCGCACCAGCTCTCCGGCGGC
CAGCGCCAGCGCGCCATGATCGCGATGGCGCTCGCGCTCGAGCCTGCGGTGCTGGTCGCGGACGAGCCCACCACCGCGCT
CGACGTCACCACCCAGGCGCAGATCCTGAAACTGATCCGCAACCTCCAGCGCAACCGCAACATGGCGGTGATGTTCATCA
CCCATGATTTCGGCGTGGTCGCCGACATCGCCGACCAGGTCGTGGTGCTCCGGCATGGCAAGGTCGTCGAGGAAGGCCCC
GCTAGCTCCGTCTTCAACAATCCGCAGCATGACTACACCAAGGCGCTGCTCGCCGCCGTACCGTCGATGGACCCGCCGGC
GCGTGAGCCGCTTGACGACCAGGCGAGGGCCGTCGAGGTGATCGGGCTGGACAAGACCTATGTCACCTCAGGCGGCTGGT
TTCGCGAGGACCGCCGCGTCGATGCCGCGCGCGAAGTCAACTTCAACATCCTCAAGGGCGAGACGCTCGGCCTCGTCGGC
GAATCCGGCTCCGGCAAATCGTCGGTGGCGCGGCTGGTGATGCGACTGATCGAAGCCGACCGCGGCACGGTGCGGATCGG
CGAGACCGATCTCACGCAGCTCTCGGGCAAGGCGCTCCGCGCCGAGCGCCATCGCATCCAGATGATCTTCCAGGACCCGT
TCGCCTCGCTCAATCCGCGGCGCAAGGTCGGGCACATCATCGCCGACGGTCCGATCGCGGCCGGCATCGATCCGAAGGTG
GCGTTCGACCGCGCCCGCGATCTCCTCAAGATGGTCGGGCTGGACGCCGGCGCGCTCGACCGCTACCCGCATGAATTCTC
CGGCGGCCAGCGCCAGCGCATCGGCATCGCGCGCGCACTCGCGCTCGAACCGGAGATCATCGTCGCGGATGAGGCCGTCT
CCGCGCTCGACGTCTCCGTGCAGGCGCAGGTGCTGCGACTGCTCGAAGACCTCAAGGCGCGCCTTGGCCTCTCGATGCTG
TTCATCACCCACGACCTCCGCGTCGCAGCGCAGATCTGCGACCGCATCGCGGTGATGCAGCGCGGCGCCATCGTCGAGTT
GAAGCCGACCGCGCAACTCTTCGCCGCGCCGGAGCACGCCTATACGCGCGAGCTGCTGGCGGCGGTGCCCGGGCGGAAGG
AACGCGCGCCGGCGGCGTGA

Protein sequence :
MTAPPAVSIKNLRIALPKGAERPFAVDGVSLALRPGKIVCVVGESGSGKSMCAHALMGLLPDTVTVTSGEIQFEGRDLLK
LDDDGWRDLRGRRLAMIFQEPMTALNPLMRIGDQMAEMFEAHGLLTPKERRAKALSLAREVGLPDPERIVRAYPHQLSGG
QRQRAMIAMALALEPAVLVADEPTTALDVTTQAQILKLIRNLQRNRNMAVMFITHDFGVVADIADQVVVLRHGKVVEEGP
ASSVFNNPQHDYTKALLAAVPSMDPPAREPLDDQARAVEVIGLDKTYVTSGGWFREDRRVDAAREVNFNILKGETLGLVG
ESGSGKSSVARLVMRLIEADRGTVRIGETDLTQLSGKALRAERHRIQMIFQDPFASLNPRRKVGHIIADGPIAAGIDPKV
AFDRARDLLKMVGLDAGALDRYPHEFSGGQRQRIGIARALALEPEIIVADEAVSALDVSVQAQVLRLLEDLKARLGLSML
FITHDLRVAAQICDRIAVMQRGAIVELKPTAQLFAAPEHAYTRELLAAVPGRKERAPAA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
oppDF2 YP_005683914.1 Oligopeptide transport ATP-binding protein OppD Not tested PiCp 6 Protein 5e-76 43
cpfrc_01561 YP_003783961.1 hypothetical protein Not tested PiCp 6 Protein 5e-76 43
oppDF2 YP_005686002.1 Oligopeptide transport ATP-binding protein OppD Not tested PiCp 6 Protein 5e-76 43
oppDF2 YP_005681814.1 Oligopeptide transport ATP-binding protein OppD Not tested PiCp 6 Protein 5e-76 43
dppD YP_005160017.1 putative peptide ABC transport system ATP-binding protein Not tested Not named Protein 4e-95 43