|
Name : BJ6T_85170 (BJ6T_85170) Accession : YP_005613348.1 Strain : Bradyrhizobium japonicum USDA 6 Genome accession: NC_017249 Putative virulence/resistance : Virulence Product : urease alpha subunit Function : - COG functional category : - COG ID : - EC number : - Position : 8836467 - 8838170 bp Length : 1704 bp Strand : - Note : - DNA sequence : ATGTCCCACACGATGAGCCGCGCGGCCTATGCGCAGATGTTCGGCCCCACGGTCGGCGACAGGGTGCGCCTGGCGGACAC CGACCTGTTCATCGAGCCCGAGAGGGACCTCACGATTTATGGCGAGGAGGTCAAGTTCGGCGGCGGCAAGGTCATTCGCG ACGGCATGGGACAATCGCAGCTCACGCGCGCGCAGGGAGCGGTCGATACCGTCATTACCAACGCGCTGATCCTCGATCAC TGGGGAATCGTCAAGGCCGACATCGCGATCAGGGACGGGCTCATTGCCGCCATCGGCAAGGCGGGCAATCCCGACACACA GCCGGGTGTCTCGATCATCATCGGGCCGGGGACGGAAATCATCGCGGGCGAGGGCAAGATCATCACCGCCGGCGGAATGG ATACGCACATTCATTTCATCTGCCCGCAGCAGATCGACGAGGCGCTTTTCTCGGGCGTCACGACCATGATGGGTGGCGGC ACCGGACCTGCCGCCGGAACGACGGCGACGACCTGTACGCCGGGGCCATGGCACATCCATCGGATGCTCGAGGCGCTGGA TGGATTCCCGATGAACTTCGGCATTTTCGGCAAGGGCAATGCGAGCGTCCCTGCGGGCCTGGTCGAGCAGATCGAAGCCG GCGCATGTGGCCTGAAGCTGCACGAAGATTGGGGTGCAACGCCCGCATCGATCGACTGCTGTCTCTCTGTCGCCGACGAC ATGGACGTGCAGGTCATGATCCACACCGATTCCCTGAACGAAGGCGGGTTCGTCGAGCGCACGATCGCCGCGTTCAAGGG CAGGACGATCCATGCGGCTCACACCGAAGGGGCCGGCGGCGGGCATGCGCCTGACATCATCAAGGTCTGCGGCGAGAGCA ACGTCATTCCAGCCTCGACAAACCCCACGCGCCCCTACACCGCGAACACGCTCGACGAAGCGCTCGACATGCTGATGGTG ACCCACCATCTGGACCGGCGCATTCCGGAGGATGTCGCCTTCGCGGAGAGCCGCATACGGAAGGAGACGATCGCCGCGGA GGACATCCTGCACGATCTCGGCGCGTTCTCGATCGTGTCGTCGGATAGCCAGGCGATGGGGCGCGTCGGCGAGGTGATCA CCCGGACGTGGCAGACCGCCGACAAGATGAAGAAGCAGTTCGGGCGGTTGCCGGAGGAGACCGGGCAGAACGACAATTAC AGGGCGCGGCGCTACGTCGCGAAATACACGATCAATCCGGCCATCGTGCAGGGAATGTCAGGCCATGTCGGTTCGCTCGA GGTCGGAAAGCTCGCGGACATCGTCGTCTGGGATCCGGCGTTCTTCGGGATCAAGCCCGACATGGTCTTGAAGTCCGGCA TGATCGTCGCCGCGATCATGGGCGACCCCAATGCATCGATACCGACGCCTCAGCCGGAATATTACCGGCCGATGTTCGGT GCCTTCGGCCGTTCTCCCGGAAGAAATTCGGTGACCTTCGTCAGTCAGGCCTCGCTCGAAACGACGAGACAGCTGGGCCT GGCCAAGCAACTCCTGCCGGTCTCGAACACGCGATCGATCGGCAAGCATTCCATGATCCTCAACGACGCGCTGCCTCGCA TGGAGGTCGATCCCGAGACCTACGAGGTGCGGGCCGACGGACGGCTCCTCACGTGTCCGCCGGTGAATGTGGTCCCGATG GCGCAGCGCTATTTCATGTACTGA Protein sequence : MSHTMSRAAYAQMFGPTVGDRVRLADTDLFIEPERDLTIYGEEVKFGGGKVIRDGMGQSQLTRAQGAVDTVITNALILDH WGIVKADIAIRDGLIAAIGKAGNPDTQPGVSIIIGPGTEIIAGEGKIITAGGMDTHIHFICPQQIDEALFSGVTTMMGGG TGPAAGTTATTCTPGPWHIHRMLEALDGFPMNFGIFGKGNASVPAGLVEQIEAGACGLKLHEDWGATPASIDCCLSVADD MDVQVMIHTDSLNEGGFVERTIAAFKGRTIHAAHTEGAGGGHAPDIIKVCGESNVIPASTNPTRPYTANTLDEALDMLMV THHLDRRIPEDVAFAESRIRKETIAAEDILHDLGAFSIVSSDSQAMGRVGEVITRTWQTADKMKKQFGRLPEETGQNDNY RARRYVAKYTINPAIVQGMSGHVGSLEVGKLADIVVWDPAFFGIKPDMVLKSGMIVAAIMGDPNASIPTPQPEYYRPMFG AFGRSPGRNSVTFVSQASLETTRQLGLAKQLLPVSNTRSIGKHSMILNDALPRMEVDPETYEVRADGRLLTCPPVNVVPM AQRYFMY |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| ureC | NP_286680.1 | urease subunit alpha | Virulence | TAI | Protein | 8e-161 | 66 |
| ureC | NP_287088.1 | urease subunit alpha | Not tested | TAI | Protein | 8e-161 | 66 |
| ureC | YP_005686358.1 | Urease alpha subunit | Not tested | PiCp 7 | Protein | 1e-144 | 61 |
| ureC | YP_005684266.1 | Urease alpha subunit | Not tested | PiCp 7 | Protein | 3e-144 | 61 |
| ureC | YP_005682174.1 | Urease alpha subunit | Not tested | PiCp 7 | Protein | 1e-144 | 61 |
| ureC | YP_003784325.1 | urease subunit alpha | Not tested | PiCp 7 | Protein | 1e-144 | 61 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| BJ6T_85170 | YP_005613348.1 | urease alpha subunit | VFG0270 | Protein | 4e-142 | 62 |
