|
Name : BJ6T_83890 (BJ6T_83890) Accession : YP_005613220.1 Strain : Bradyrhizobium japonicum USDA 6 Genome accession: NC_017249 Putative virulence/resistance : Virulence Product : urease alpha subunit Function : - COG functional category : - COG ID : - EC number : - Position : 8698041 - 8699756 bp Length : 1716 bp Strand : - Note : - DNA sequence : ATGTCCGTCAAAATAAAGCGTTCCGTCTATGCCGACATGTTCGGCCCGACCACCGGCGACAAGGTGCGATTGGCAGATAC AGATCTCATCATCGAGGTCGAGAAGGATTTCACCACCTATGGCGAGGAGGTGAAGTTCGGCGGCGGCAAGGTGATCCGTG ACGGCATGGGCCAGTCGCAGGTCACCAACAAGCAGGGCGCGGCCGACACCGTCATCACCAATGCGCTGATCGTCGATCAC TGGGGCATCGTGAAGGCCGACGTCGCGATCAAGGACGGCATGATCTCCGCGATCGGCAAGGCCGGCAATCCCGACATCCA GCCGGGCGTCACCATCATCGTCGGCCCCGGCACCGACGTGATCGCGGGCGAAGGGAAAATCCTGACCGCCGGCGGCTTCG ACAGCCACATCCATTTCATCTGTCCGCAGCAGATCGAGCACGCGCTGATGTCCGGCGTCACCTCGATGCTCGGTGGCGGC ACCGGTCCCTCGCACGGCACGTTCGCCACCACCTGCACGCCGGGGCCGTGGCACATGGGGCGGATGATCCAGTCGTTCGA CGCGTTCCCGGTCAATCTCGGCATCTCCGGCAAGGGCAACGCGTCGCGCCCCGCCGCGCTGGTCGAAATGATCAAGGCCG GCGCCTGTGCGCTGAAGCTGCACGAGGACTGGGGCACGACGCCGGCGGCGATCGATACCTGCCTGTCGGTGGCTGACGAC TACGACATTCAGGTGATGATCCACACCGACACGCTGAACGAATCCGGCTTCGTCGAGGACACGGTCAAGGCATTCAAGGG CCGCACCATCCATGCCTTTCACACCGAGGGCGCCGGCGGCGGGCATGCGCCTGATATCATCAAGGTCGCGGGGCTGAAGA ACGTGCTGCCTTCCTCGACCAATCCGACGCGGCCGTTCACCCGCAACACCCTCGACGAGCATCTGGACATGCTGATGGTG TGCCATCACCTCGATCCCTCGATCGCCGAGGACCTCGCCTTCGCCGAGAGCCGCATCCGCAAAGAGACCATCGCGGCCGA GGATATCCTGCACGATCTCGGCGCGCTCTCGATGATCTCCTCGGACTCCCAGGCCATGGGCCGCCTTGGTGAAGTCATCA TCCGGACCTGGCAGACCGCGGACAAGATGAAGAAGCAGCGCGGGTCGCTCGACCAGGACAAGGGCAAGGACAACGACAAT TTCCGCGTCAAGCGCTACATCGCCAAGTACACGATCAATCCCGCGATCGCCCACGGCGTGTCGAAACTGATCGGCTCGGT CGAGAAGGGCAAGCTCGCCGATCTCGTGCTGTGGTCGCCGGCCTTCTTCGGCGTCAAGCCGGACTGTATCATCAAGGGCG GCTCGATCGTCGCCGCCCCCATGGGCGATCCCAACGCCTCGATCCCGACGCCGCAGCCGGTGCACTATCAGCCGATGTTC GGTGCCTTCGGCAAGGCGCGCACCGCGTCGTCCGTGGTGTTCACCTCGAAGGCGGCCGTCACCGGCGGCCTCGCGCGAAA GCTCGGCATCGACAAGAAGCTCTATGCGGTGCAGAACACCCGCGGAAAGATCTCGAAGAAGAGCATGATCCACAACGACG CCACGCCCAATATCGAGGTCGATCCCGAGACCTACGAGGTGCGCGCCGACGGCGAACTGCTGACCTGCGCGCCCGCCGAG GTACTGCCGATGGCGCAGCGATATTTCATGTACTGA Protein sequence : MSVKIKRSVYADMFGPTTGDKVRLADTDLIIEVEKDFTTYGEEVKFGGGKVIRDGMGQSQVTNKQGAADTVITNALIVDH WGIVKADVAIKDGMISAIGKAGNPDIQPGVTIIVGPGTDVIAGEGKILTAGGFDSHIHFICPQQIEHALMSGVTSMLGGG TGPSHGTFATTCTPGPWHMGRMIQSFDAFPVNLGISGKGNASRPAALVEMIKAGACALKLHEDWGTTPAAIDTCLSVADD YDIQVMIHTDTLNESGFVEDTVKAFKGRTIHAFHTEGAGGGHAPDIIKVAGLKNVLPSSTNPTRPFTRNTLDEHLDMLMV CHHLDPSIAEDLAFAESRIRKETIAAEDILHDLGALSMISSDSQAMGRLGEVIIRTWQTADKMKKQRGSLDQDKGKDNDN FRVKRYIAKYTINPAIAHGVSKLIGSVEKGKLADLVLWSPAFFGVKPDCIIKGGSIVAAPMGDPNASIPTPQPVHYQPMF GAFGKARTASSVVFTSKAAVTGGLARKLGIDKKLYAVQNTRGKISKKSMIHNDATPNIEVDPETYEVRADGELLTCAPAE VLPMAQRYFMY |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| ureC | NP_286680.1 | urease subunit alpha | Virulence | TAI | Protein | 0.0 | 67 |
| ureC | NP_287088.1 | urease subunit alpha | Not tested | TAI | Protein | 0.0 | 67 |
| ureC | YP_005682174.1 | Urease alpha subunit | Not tested | PiCp 7 | Protein | 1e-163 | 61 |
| ureC | YP_003784325.1 | urease subunit alpha | Not tested | PiCp 7 | Protein | 1e-163 | 61 |
| ureC | YP_005686358.1 | Urease alpha subunit | Not tested | PiCp 7 | Protein | 1e-163 | 61 |
| ureC | YP_005684266.1 | Urease alpha subunit | Not tested | PiCp 7 | Protein | 3e-163 | 61 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| BJ6T_83890 | YP_005613220.1 | urease alpha subunit | VFG0270 | Protein | 9e-160 | 63 |
