Gene Information

Name : BJ6T_81280 (BJ6T_81280)
Accession : YP_005612962.1
Strain : Bradyrhizobium japonicum USDA 6
Genome accession: NC_017249
Putative virulence/resistance : Unknown
Product : transposase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 8403384 - 8404742 bp
Length : 1359 bp
Strand : -
Note : -

DNA sequence :
ATGCGCCGGATCAAGGAAGTCCTTCGGTTAAAACATTTTCAAGGCCTGCCAGAGCGGGCCATCGCGCGGAGCGTGGGCGT
CAGCAACGGCGTTGTGCACAGCTACCTGAGCCGCGCCCGCTCTGCTGGGTTGAGCTGGCCGCTTCCGGAGGGAATGACCG
ATGAAGACCTGGAGCTTTTGCTTTTCCCGGCCCCACGACCAGCGTCTCAGAGCCCGCAGCGGCCGGTGCCCGACTGGAGC
TACATCGATAAAGAGCTCCGCCGGCGCAACGTAACCCGTCGCCTGCTCTGGGAGGAGTATCGCGCCGTTAATCCCGACGG
TTTCGGGTACACGTGGTTCTGCACTACCTACGAGGCCTGGAAGGGGCGGGTCCGACCTTCGATGCGGCAGATTCATCTGG
GCGGCGAGAAGGTGTTCGTGGATTTCGCCGGCGACACCATCGACATCGTCGATCCCCTGACCGGGGAAGTGCAGCCGATG
AAGCTGTTCGTCGCGGCGATGGGCGCTTCGAACTACACCTACGCCGAGGCCTGCCCCAGCGAGAGCTTGGCCGACTGGAT
CCGGGCCCACGTCAACTTGTTCACGTTTTTGAGCGGAACGCCGACGTTCGTGGTCTGCGACAACCTCAAAGCCGCCGTCA
GCAACCCCGACCGCTACGATCCCGGCCTCAATCGCACTTATGCCGAGATGGCGAGCCATTACGGCACGGCCATTCTCGCC
GCACGGCCGCGGCGCCCAAAAGACAAGGCGAAGGTCGAGGTCGCGGTGCAAATCGCCCAGCGCTGGATTCTGGCCCGGCT
GCGCAATCAGCGCTTCTTTTCCCGGGCCGAGCTCAACGCCGCCATCAAGACACTCGTCGACGAACTCAATGCTCGTCAAA
TGCGTGGCTTCGGCTCAAGCCGCGCCGAACTGTTTGCCGAACTCGACAAACCCAAGCTAACCCCGCTGCCAGATCAGCCT
TATGCCTTCGCACGCTGGAAGCGCTGCCGCCTCGCTCCCGATTATCATGTCGAGGTCGACGGCCATTGGTACTCCGCGCC
GTATCGTCTGATTGGCGAGCTGGTCGATGCCCGTATCGACGATCGGACGGTCGAGATCTTCCACAAGGGCCAGCGGATCG
CCAGCCATGCCCGCGCGCCCAACCGACGCGGACACACCACCATCGCCGACCACATGCCCAGCGCCCATCGCCGCTACGGC
AAATGGACCCCCGCCGCGGTGATCGCCGCCGGCGAGCGGATCGGTCCTTCGACAGCAGCGTTTTTCCAGGCCGTGATCGA
CGCCCGGCCCCATCCAGAACAAGGCTTTCGAACCTGCCTTGGCATTCTGGCGCTCGTCAAAAGCTACGGCGCCGACTGA

Protein sequence :
MRRIKEVLRLKHFQGLPERAIARSVGVSNGVVHSYLSRARSAGLSWPLPEGMTDEDLELLLFPAPRPASQSPQRPVPDWS
YIDKELRRRNVTRRLLWEEYRAVNPDGFGYTWFCTTYEAWKGRVRPSMRQIHLGGEKVFVDFAGDTIDIVDPLTGEVQPM
KLFVAAMGASNYTYAEACPSESLADWIRAHVNLFTFLSGTPTFVVCDNLKAAVSNPDRYDPGLNRTYAEMASHYGTAILA
ARPRRPKDKAKVEVAVQIAQRWILARLRNQRFFSRAELNAAIKTLVDELNARQMRGFGSSRAELFAELDKPKLTPLPDQP
YAFARWKRCRLAPDYHVEVDGHWYSAPYRLIGELVDARIDDRTVEIFHKGQRIASHARAPNRRGHTTIADHMPSAHRRYG
KWTPAAVIAAGERIGPSTAAFFQAVIDARPHPEQGFRTCLGILALVKSYGAD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
APECO1_3528 YP_854247.1 transposase for ISEc12 Not tested PAI I APEC-O1 Protein 3e-99 46
unnamed CAC39294.1 hypothetical protein Not tested LPA Protein 4e-99 46
ORF_6 AAZ04417.1 putative transposase subunit Not tested PAI I APEC-O1 Protein 2e-99 46
VPI2_0005c ACA01822.1 IstA Not tested VPI-2 Protein 4e-102 44