Gene Information

Name : BJ6T_79390 (BJ6T_79390)
Accession : YP_005612773.1
Strain : Bradyrhizobium japonicum USDA 6
Genome accession: NC_017249
Putative virulence/resistance : Unknown
Product : transposase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 8212083 - 8213555 bp
Length : 1473 bp
Strand : -
Note : -

DNA sequence :
ATGAAGTACCGTCAGACCGATAGCCCACCCGTGGCCGCCGCCAAGGCTTCGTTCAGCACCTCGACCGCTTACCGGATCGA
GAAGGATCGACGCCTTCCGTCGCAGAAGAAGGCTCCCCGCGGCCGTCGCCGGCCAGATCCCTTGGCCCGCGTATTTGAGA
CAGATATCGCGCCGATGCTGAAGGCCGCCCCCGGTGTGCGGCCGGTCACGATCTTCGAGGAGTTGCTCCGACGCCATCCC
GAGCTCGGCGCCGGCATCCGTCGCACGCTGGAGCGCCGGATCCGGGCCTGGCGGGCGATCCACGGCGAGGAGCAGGAGGT
CATCTTCCGCCAGACCCACGAACCCGGTCAGCGCGGCCTGTCCGACTTCACCGACATGGGCGAATTGGGTGTCACGATCG
CGGGCGTACCGCTCGACCATCGTCTCTATTACTTCCGGCTGGCCTATTCCGGGTTTGAGCACGCCCATGTCGTGCTCGGC
GGTGAGAGCTTCGTCGCTCTGGCCGAAGGCCTGCAGAATGCCTTGTGGTCACTCGGTGGGGCGCCACGGGAGCATCGCAC
CGACAGCCTGTCGGCCGCCTTTTGCAATCTCGACCGCGACGCCAAAGACGATCTGACGCGGCGATACGAAGACCTCTGTG
CCCATTACGGCATGCGGCCTTCCCGCAACAATCGTGGCATCGCCCACGAGAACGGGGCGATCGAGAGTTCGCATGGTCAT
CTCAAGCGAGCGATCGGCGACGCGCTGTTGCTGCGTGGCACCGCCGACTTCGACGATCTAGCTGCCTATCGTGGCTTCAT
CGATGAGATCGCCAGCCGCCGCAATGCCCGCAACGCCAAGCGGATCGACAGTGAACGTAGCGCACTTCAGGATCTGCCGG
ACCGCCGCACGTCGGACTATGAAGAGGTGATCGTCCACGTGACGTCGTCCGGCGGCTTCACCTTGCGCAAGGTGTTCTAC
ACGGTGCCGTCGCGCTTGATCGGCCATCGGCTGCGGGTGCGCCTGTATGACGATCACCTCGACGTGTTTGTCGGCGGCAC
GCATCTCCTCACCTTGCCGCGCGGGCGGCCGCATCCCAATGGCAAGCACGATCAGGTCGTCGATTATCGGCACGTGATCC
ATTCCTTGCGGCGCAAGCCGATGGCGCTCCTCAACCTGGTCTACCGCGACCAGCTGTTCCCCCGGGAAGCTTACCGCCGA
GCCTTCGACGTCTTGCGCAAACGCTTACCGGACAAGAAGGCCTGCCGGATCATGGTCGATCTCCTCGCACTCGCCCATGA
GCGCGGTTGCGAGGCCGAACTCGCCAATCAGCTCACGGCTGACCTGAACGACGGCCGGCTGCCCGACCTCAACCGGCTAC
GTACTCACTTCGCCCCGGATCCCGCCCAGGTGCCGAACGTCGTGGTACGCCTCGCACCGCTCGCCACCTATGAATGCCTC
ATCGGTACCGCCGAGATCGGAGGCGCCGCATGA

Protein sequence :
MKYRQTDSPPVAAAKASFSTSTAYRIEKDRRLPSQKKAPRGRRRPDPLARVFETDIAPMLKAAPGVRPVTIFEELLRRHP
ELGAGIRRTLERRIRAWRAIHGEEQEVIFRQTHEPGQRGLSDFTDMGELGVTIAGVPLDHRLYYFRLAYSGFEHAHVVLG
GESFVALAEGLQNALWSLGGAPREHRTDSLSAAFCNLDRDAKDDLTRRYEDLCAHYGMRPSRNNRGIAHENGAIESSHGH
LKRAIGDALLLRGTADFDDLAAYRGFIDEIASRRNARNAKRIDSERSALQDLPDRRTSDYEEVIVHVTSSGGFTLRKVFY
TVPSRLIGHRLRVRLYDDHLDVFVGGTHLLTLPRGRPHPNGKHDQVVDYRHVIHSLRRKPMALLNLVYRDQLFPREAYRR
AFDVLRKRLPDKKACRIMVDLLALAHERGCEAELANQLTADLNDGRLPDLNRLRTHFAPDPAQVPNVVVRLAPLATYECL
IGTAEIGGAA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAL67341.1 R6-like protein Not tested PAI II CFT073 Protein 4e-86 44
r6 AAC61728.1 transposase R6 Not tested PAI I CFT073 Protein 2e-86 44
unnamed AAL67386.1 R6-like protein Not tested PAI II CFT073 Protein 2e-86 44
c3607 NP_755482.1 hypothetical protein Not tested PAI I CFT073 Protein 4e-86 44
c5144 NP_756992.1 hypothetical protein Not tested PAI II CFT073 Protein 4e-86 44

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
BJ6T_79390 YP_005612773.1 transposase VFG1728 Protein 2e-86 44