Gene Information

Name : BJ6T_79190 (BJ6T_79190)
Accession : YP_005612753.1
Strain : Bradyrhizobium japonicum USDA 6
Genome accession: NC_017249
Putative virulence/resistance : Unknown
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 8190042 - 8190347 bp
Length : 306 bp
Strand : -
Note : -

DNA sequence :
ATGGACGGCCGCGGTGATCCCCATTGCCTCGGGCGTGCGGGTGGCCACACCGATATGCGCCGCGGCATGAACTCGCTGGC
CTTGCTGGTGCAGGAGGCCTTTAGGCGCGACCCGCACGGCGGCGACCTCTATGTGTTCCGTGGCAAGAGCGGCAAGCTGA
TCAAGATCCTTTGGCATGATGGGCTGGGCATGTCGCTCTATGCCAAGCGGCTTGAGCCCGGCCGCTTTCTCTGGCCATCG
TCGGCTGATGGCGTGGTGACGGTCACCCCAGCCCAGCTTGGCTACCTGCTCGATCACCCATGTTGA

Protein sequence :
MDGRGDPHCLGRAGGHTDMRRGMNSLALLVQEAFRRDPHGGDLYVFRGKSGKLIKILWHDGLGMSLYAKRLEPGRFLWPS
SADGVVTVTPAQLGYLLDHPC

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BCAM0247 YP_002232879.1 putative transposase Not tested BcenGI11 Protein 2e-15 57
ECO103_3553 YP_003223420.1 hypothetical protein Not tested LEE Protein 3e-18 55
Z4316 NP_289542.1 hypothetical protein Not tested OI-122 Protein 3e-18 55
pB171ORF50 CAD66190.1 ORF50 protein of pB171 Not tested PAI III 536 Protein 2e-18 53
Z1132 NP_286667.1 hypothetical protein Not tested TAI Protein 5e-16 53
unnamed AAC31493.1 L0014 Not tested LEE Protein 3e-16 53
Z1571 NP_287075.1 hypothetical protein Not tested TAI Protein 5e-16 53
hp4 AAC61716.1 Hp4 Not tested PAI I CFT073 Protein 3e-16 53
c3578 NP_755453.1 hypothetical protein Not tested PAI I CFT073 Protein 4e-16 53
unnamed AAL99258.1 unknown Not tested LEE Protein 3e-16 53
Z4336 NP_289561.1 hypothetical protein Not tested OI-122 Protein 4e-16 53
unnamed ACU09438.1 IS66 family element orf2 Not tested LEE Protein 3e-16 53
Z5097 NP_290248.1 prophage-associated protein Not tested LEE Protein 4e-16 53
aec52 AAW51735.1 Aec52 Not tested AGI-3 Protein 2e-18 53
ECs4546 NP_312573.1 hypothetical protein Not tested LEE Protein 4e-16 53
unnamed ADD91739.1 hypothetical protein Not tested PAI-I AL862 Protein 2e-18 53
l0014 CAD33776.1 L0014 protein Not tested PAI I 536 Protein 5e-14 52
unnamed AAL08461.1 unknown Not tested SRL Protein 5e-16 52
c3561 NP_755436.1 hypothetical protein Not tested PAI I CFT073 Protein 2e-16 52
ECUMN_3327 YP_002414007.1 putative transposase ORF2, IS66 family Not tested Not named Protein 2e-16 52
Z1160 NP_286695.1 hypothetical protein Not tested TAI Protein 4e-17 48
Z1599 NP_287103.1 hypothetical protein Not tested TAI Protein 4e-17 48
Z4338 NP_289563.1 hypothetical protein Not tested OI-122 Protein 4e-16 45
ECUMN_3364 YP_002414037.1 putative transposase ORF2, IS66 family Not tested Not named Protein 6e-17 45
ECO103_3567 YP_003223430.1 hypothetical protein Not tested LEE Protein 4e-16 45
tnpB AEZ06052.1 transposition helper protein Not tested Tn6167 Protein 6e-07 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
BJ6T_79190 YP_005612753.1 hypothetical protein VFG1665 Protein 8e-19 53
BJ6T_79190 YP_005612753.1 hypothetical protein VFG1709 Protein 1e-16 53
BJ6T_79190 YP_005612753.1 hypothetical protein VFG0792 Protein 1e-16 53
BJ6T_79190 YP_005612753.1 hypothetical protein VFG1517 Protein 2e-14 52
BJ6T_79190 YP_005612753.1 hypothetical protein VFG1698 Protein 5e-17 52
BJ6T_79190 YP_005612753.1 hypothetical protein VFG1052 Protein 2e-16 52
BJ6T_79190 YP_005612753.1 hypothetical protein VFG1737 Protein 2e-17 45