Gene Information

Name : BJ6T_78030 (BJ6T_78030)
Accession : YP_005612636.1
Strain : Bradyrhizobium japonicum USDA 6
Genome accession: NC_017249
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 8065217 - 8066461 bp
Length : 1245 bp
Strand : -
Note : probable maturase; reverse transcriptase

DNA sequence :
GTGAACTCCGGCAAACCGTTGCCCATCACCAAGCGGATGGTGTGGGAAGCCTATAAGCTTGTGAAGAAGGGAAAGGCGGC
GGGCGTCGATGGCCAGAGTCTCGAAGACTTTGCCGGCGATCTTGAGAACCACCGCTACCGGCTGTGGAATCGGTTGGTGT
CAGGAAGTTACTTCCCGCCACCAGTGCGGCGGGTCGAGATTCCTAAGGCCGGCGGTGGGATTCGTCCTCTTGGCATACCG
ACGGTCGCGGACCGTATCGCCCAGATGGTGGTCAAACGGTGTCTGGAGCCGGTGTTGGATGGAGAATTTGATCCGGACTC
CTACGGCTACAGGCCCGGAAAATCGGCCCATCAGGCCATAGAGCAGGCGCGTAAGCGGTGCTGGCAGCACGACTGGGTCG
TAGATCTCGACATCAAGAGCTTTTTCGACACGATCGATCATGAACTCTTGATGCGCGCGGTCTATCGACACACGAAAGCT
GACTGGATCCGGCTCTACATTGAGCGGTGGCTTAAGGCTCCGGTCGAGATGCCCGATGGATCGGTTCGGGCGAGGACGAC
AGGCAGGTCTCAAGGGGGTGTGGTCAGTCCAATCCTGGCAAACTTGTTCCTGCACTACGTGTTCGATGTTTGGATGAAGG
GGTCTTATCCCCACATTCCGTTCGAACGCTACGCCGACGACATCATCTGCCATTGCCGCACGCGGCAGGAAGCGGAGGAA
CTCAAATCGGCGCTGGAACGACGGTTTGCTGACTGCCATTTATTGCTGCATCCGGAGAAGACTAAAGTGGTCTACTGCGC
TGACAGCAATCGACGGCGGTCCTACCCGCAGATCCATTTTGACTTCCTGGGCTTTAGCTTCCGCCCCCGTATGGCGAAGA
ACCGGTGGGGCAGGATCTTCACCTGCTTCCTTCCGGGCGTGAGTCCGAACTCTCTCAAGGAGATGAGGGCTCGCATTCGA
GGATGGCGCTTGCCTCAGCACTCGCCGCTTCCGCTTGAAGACATCGCGCGTAGTCTCAGCCCCGTCCTTCGGGGCTGGGA
TCAATACTACGGGCGATTCTACCCGACGGAACTGCGTAGGCTCTATGAGTACTTCGATGAGCGCCTCGGCGCGTGGCTTC
GGTGCAAGTACAAGCAACTGAAGGGCCATCGGGGACGGTCGTTGCGGAAACTCAACGAGATGGCGAAGCAAAATCCAAAG
CTCTTTGTCCATTGGCAAAAGCTTGGACGGGCTACGGTTGGATAA

Protein sequence :
MNSGKPLPITKRMVWEAYKLVKKGKAAGVDGQSLEDFAGDLENHRYRLWNRLVSGSYFPPPVRRVEIPKAGGGIRPLGIP
TVADRIAQMVVKRCLEPVLDGEFDPDSYGYRPGKSAHQAIEQARKRCWQHDWVVDLDIKSFFDTIDHELLMRAVYRHTKA
DWIRLYIERWLKAPVEMPDGSVRARTTGRSQGGVVSPILANLFLHYVFDVWMKGSYPHIPFERYADDIICHCRTRQEAEE
LKSALERRFADCHLLLHPEKTKVVYCADSNRRRSYPQIHFDFLGFSFRPRMAKNRWGRIFTCFLPGVSPNSLKEMRARIR
GWRLPQHSPLPLEDIARSLSPVLRGWDQYYGRFYPTELRRLYEYFDERLGAWLRCKYKQLKGHRGRSLRKLNEMAKQNPK
LFVHWQKLGRATVG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed ABR13526.1 reverse transcriptase Not tested PAGI-7 Protein 1e-110 53
unnamed CAD33771.1 putative reverse transcriptase Not tested PAI I 536 Protein 7e-83 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
BJ6T_78030 YP_005612636.1 hypothetical protein VFG1512 Protein 4e-83 43