Gene Information

Name : BJ6T_60890 (BJ6T_60890)
Accession : YP_005610931.1
Strain : Bradyrhizobium japonicum USDA 6
Genome accession: NC_017249
Putative virulence/resistance : Virulence
Product : betaine aldehyde dehydrogenase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 6151297 - 6152781 bp
Length : 1485 bp
Strand : -
Note : -

DNA sequence :
ATGTCTGTTGCATATGACTTTGTGCATTCGCAGGCCACCGAATTCATGGCCCGGCCGCAGCATCTGCTCATCGACGGTCG
CCGCGTCCCCGCCAGCTCCGGCCGTACCTTCAAATCCCTCAATCCCGCCACCGGGCAGGTCATCGCCGTCGTGGCCGAAG
GCGGCGAGGCCGATGTCGAGCACGCCGTGGCAGCCGCACGCCGCGCGTTCGAAGGTCCGTGGCGCACGATACGCGCCTCC
GAGCGCGGCCAGATCCTGCTGCGTTGGGCGGACCTGCTCAAGCAGCACTCGGAAGAGATCATCGAGCTCGAATCGATCGA
TGCCGGCAAGCCGATCTCCGCGACGATGCGCCAGGACTTTCCGGCTGCCGTCGACACGCTGACCTACTATGCCGGCTGGG
CCGACAAGATCAGCGGCGACGTCGTACCGGTACGTGACGATGCCCTGACCTACACCGTGCGCGAGCCGGTCGGCGTGGTC
GCGGCAATCGTGCCGTGGAATTTTCCGCTGATGATCGGCATGTGGAAGCTCGCACCGGCGCTGGCCTGCGGCTGCACCAT
CGTGATGAAGCCGGCCGAGCTGACCTCACTTTCGGCGCTGCGCATCGCCGAGCTTGCACTCGAAGCTGGCCTGCCGGCGG
GCGTCTTCAACGTCGTCACCGGTCCGGGCCGGGTCGTCGGCGACGCGCTGGTCAATCACCCTGATGTGGACAAGGTCACC
TTCACCGGCTCGCCCGGCGTCGGCCGTGGAATCATGAAGGGCGCCGCCAGCAACTTCAAGCGCGTCTCGCTCGAGCTCGG
CGGCAAGTCGGCGAACGTCATCTTTGACGATGCCGATCTCGAAGCGGCCTCCAAGGCTGCGGCCTCAGGCATCTTCTTCA
ATGCCGGCCAGGTGTGCTCGGCCGGCTCCCGCGTGCTGGTGCAGGAGAAGGCCTATGACGAAGTCGTGGAGCGGCTGGCT
GCGCGCGCAAAGTCGCTCAGGATCGGCGATCCGCTCGATCGCAAGACGGCGCTCGGACCTGTGATCTCCGAGAAGCAGAT
GAAGTCGATCCTCGACTATGTCGACATCGGCCAAAAGGAGGGCGCGACCCTCGTCACCGGTGGCGAGAAAGTTGGAGATC
GCGGCTATTTCATCAGCCCCGCGGTGTTCGCAGGCGTCGCGCACGAGATGCGGATCTCGCAGGAGGAAATCTTCGGCCCC
GTCGTCAGCGTCATCAAGTTCAAGGACGAGGCGGATGCTTTACGGATCGCCAACGGCACGGCCTACAGCCTCGCCGCCGG
TGTCTGGAGCCGCGACATCGGCAAGCTCCAGCGCTTCGCCAAGCGGGCGCGCGCGGGCACGGTCTGGATGAACACCTATG
GCTACACCGACGTGCGCCTGCCCTGGGGTGGCGAGCGCGACTCCGGCCTCGGCCGTGAGCATGGCACCGCCGCGCTCGAC
AATTTCACCGAGCCGAAGGCTGTCTGGATGAATCTGGCCGTCTGA

Protein sequence :
MSVAYDFVHSQATEFMARPQHLLIDGRRVPASSGRTFKSLNPATGQVIAVVAEGGEADVEHAVAAARRAFEGPWRTIRAS
ERGQILLRWADLLKQHSEEIIELESIDAGKPISATMRQDFPAAVDTLTYYAGWADKISGDVVPVRDDALTYTVREPVGVV
AAIVPWNFPLMIGMWKLAPALACGCTIVMKPAELTSLSALRIAELALEAGLPAGVFNVVTGPGRVVGDALVNHPDVDKVT
FTGSPGVGRGIMKGAASNFKRVSLELGGKSANVIFDDADLEAASKAAASGIFFNAGQVCSAGSRVLVQEKAYDEVVERLA
ARAKSLRIGDPLDRKTALGPVISEKQMKSILDYVDIGQKEGATLVTGGEKVGDRGYFISPAVFAGVAHEMRISQEEIFGP
VVSVIKFKDEADALRIANGTAYSLAAGVWSRDIGKLQRFAKRARAGTVWMNTYGYTDVRLPWGGERDSGLGREHGTAALD
NFTEPKAVWMNLAV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
hpaE AAO17179.1 HpaE Not tested tcd island Protein 3e-78 45
ORF SG19 AAN62241.1 putative aldehyde dehydrogenase Not tested PAGI-3(SG) Protein 2e-80 43
VC0819 NP_230467.2 aldehyde dehydrogenase Not tested VPI-1 Protein 9e-80 42
orf17 AAO17183.1 Orf17 Not tested tcd island Protein 2e-66 41
aldA AAK20776.1 aldehyde dehydrogenase Virulence VPI Protein 2e-80 41
aldA AAC12273.1 aldehyde dehydrogenase Virulence VPI Protein 2e-80 41
aldA AAK20747.1 aldehyde dehydrogenase Virulence VPI Protein 2e-80 41
aldA-1 YP_001216300.1 aldehyde dehydrogenase Not tested VPI-1 Protein 3e-80 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
BJ6T_60890 YP_005610931.1 betaine aldehyde dehydrogenase VFG0082 Protein 4e-80 42